| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3988 |
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| Symbol | dppB |
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| ID | 6268372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3718869 |
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| End bp | 3719888 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641727834 |
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| Product | dipeptide transporter permease DppB |
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| Protein accession | YP_001882266 |
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| Protein GI | 187730514 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAGT TTATTCTCCG ACGTTTGGGA CTCGTCATCC CCACGTTTAT CGGTATTACC
CTTCTCACAT TTGCCTTTGT CCACATGATC CCGGGCGATC CGGTGATGAT CATGGCAGGC
GAACGTGGGA TCTCCCCTGA GCGTCACGCG CAGCTGCTGG CTGAACTCGG CTTAGATAAA
CCGATGTGGC AGCAGTATCT CCATTACATT TGGGGCGTAA TGCACGGCGA TCTAGGCATT
TCAATGAAAA GCCGAATTCC AGTATGGGAA GAGTTCGTGC CGCGCTTTCA GGCCACGCTG
GAACTTGGCG TCTGCGCGAT GATTTTTGCT ACGGCAGTCG GTATTCCGGT TGGTGTGCTG
GCTGCGGTTA AACGCGGTTC CATTTTCGAT CACACTGCAG TTGGCCTGGC GCTGACCGGC
TACTCGATGC CGATCTTCTG GTGGGGCATG ATGCTGATCA TGCTGGTTTC GGTGCACTGG
AACCTGACGC CCGTCTCCGG TCGCGTGAGC GATATGGTGT TCCTCGATGA CTCCAATCCG
TTAACCGGTT TTATGCTAAT CGACACCGCC ATCTGGGGTG AAGACGGCAA CTTTATCGAT
GCCGTCGCCC ATATGATCTT ACCTGCCATT GTGCTGGGTA CTATTCCGCT GGCGGTCATT
GTGCGTATGA CACGCTCCTC GATGCTGGAA GTGCTGGGCG AGGATTACAT CCGCACCGCG
CGCGCCAAAG GGCTAACCCG CATGCGGGTG ATTATCGTCC ATGCGCTGCG TAACGCGATG
CTGCCGGTGG TGACCGTTAT CGGCCTGCAG GTGGGAACAT TGCTGGCGGG GGCGATTCTG
ACCGAAACCA TCTTCTCGTG GCCCGGTCTG GGACGCTGGT TGATTGACGC ACTGCAACGC
CGCGACTATC CGGTAGTGCA GGGCGGCGTA TTGCTGGTGG CGACGATGAT TATCCTCGTC
AACTTGCTGG TCGATCTGCT GTACGGCGTG GTGAACCCGC GTATTCGTCA TAAGAAGTAA
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| Protein sequence | MLQFILRRLG LVIPTFIGIT LLTFAFVHMI PGDPVMIMAG ERGISPERHA QLLAELGLDK
PMWQQYLHYI WGVMHGDLGI SMKSRIPVWE EFVPRFQATL ELGVCAMIFA TAVGIPVGVL
AAVKRGSIFD HTAVGLALTG YSMPIFWWGM MLIMLVSVHW NLTPVSGRVS DMVFLDDSNP
LTGFMLIDTA IWGEDGNFID AVAHMILPAI VLGTIPLAVI VRMTRSSMLE VLGEDYIRTA
RAKGLTRMRV IIVHALRNAM LPVVTVIGLQ VGTLLAGAIL TETIFSWPGL GRWLIDALQR
RDYPVVQGGV LLVATMIILV NLLVDLLYGV VNPRIRHKK
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