| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3981 |
|---|
| Symbol | |
|---|
| ID | 6268486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 3713310 |
|---|
| End bp | 3713567 |
|---|
| Gene Length | 258 bp |
|---|
| Protein Length | 85 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641727829 |
|---|
| Product | putative IS1 encoded protein |
|---|
| Protein accession | YP_001882262 |
|---|
| Protein GI | 187733782 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.20354 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCATGTT TTACGGCAAT GAGAGCAGAG ATAGCGCTGA TGTCCGGCAG TGCTTTTGCC
GTTACGCACC ACGCCTTCAG TAGCGGAGCA GGAAGGACAT CTGATGGAAA TGGAAGCCAC
GCAAGCACCT TAAAATCACC ATCATACACT AAATCAGTAA GTTGGCAGCA TTACCCTTAT
CCCGTTAGCA CTACCGGAAA ATTACCCGCT GCCGGGGATT ATAGCGGTAT TGCTACCATA
CATGTCGAAC TGGAGTAA
|
|---|
| Protein sequence | MPCFTAMRAE IALMSGSAFA VTHHAFSSGA GRTSDGNGSH ASTLKSPSYT KSVSWQHYPY
PVSTTGKLPA AGDYSGIATI HVELE
|
|---|
| |