| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3966 |
|---|
| Symbol | glyS |
|---|
| ID | 6271038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 3699627 |
|---|
| End bp | 3701696 |
|---|
| Gene Length | 2070 bp |
|---|
| Protein Length | 689 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641727814 |
|---|
| Product | glycyl-tRNA synthetase subunit beta |
|---|
| Protein accession | YP_001882247 |
|---|
| Protein GI | 187731977 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGA AAACTTTTCT GGTGGAAATC GGCACTGAAG AGCTGCCACC AAAAGCACTG
CGCAGCCTGG CTGAGTCCTT TGCTGCGAAT TTTACTGTGG AGCTGGATAA CGCTGGCCTC
GCACACGGCA CCGTTCAATG GTTTGCTGCT CCGCGTCGTC TGACGCTGAA AGTAGCTAAC
CTGGCGGAAG CGCAACCGGA TCGTGAAATC GAAAAACGCG GCCCGGCGAT TGCCCAGGCG
TTCGACGCTG AAGGCAAACC GAGCAAAGCG GCAGAAGGTT GGGCGCGTGG TTGCGGTATT
ACCGTTGACC AGGCTGAGCG TCTGACTACC GATAAAGGCG AATGGCTGCT GTATCGCGCC
CATGTGAAGG GCGAAAGCAC CGAAGCACTG CTGCCGAATA TGGTTGCGAC TTCTCTGGCG
AAACTGCCGA TCCCGAAACT GATGCGTTGG GGCGCAAGCG ACGTGCACTT CGTGCGTCCG
GTGCACACCG TGACCCTGCT GCTGGGCGAC AAAGTCATTC CGGCAACTAT TCTGGGCATT
CAGTCCGATC GCGTGATTCG CGGCCACCGC TTTATGGGCG AACCGGAATT CACCATCGAC
AACGCCGATC AGTATCCGGA AATTCTGCGT GAGCGCGGGA AAGTCATCGC CGATTACGAA
GAACGTAAAG CGAAGATTAA AGCCGATGCC GAAGAAGCAG CGCGTAAGAT TGGCGGTAAC
GCTGACTTAA GCGAAAGCCT GCTGGAAGAA GTGGCTTCGC TGGTGGAGTG GCCGGTCGTT
CTGACCGCAA AATTCGAAGA GAAATTCCTC GCGGTGCCGG CTGAAGCCCT GGTTTACACC
ATGAAAGGTG ACCAGAAATA CTTCCCGGTG TATGCGAACG ATGGCAAACT GCTGCCGAAC
TTCATCTTCG TTGCCAACAT CGAATCGAAA GATCCGCAGC AAATTATCTC TGGTAACGAG
AAAGTCGTTC GTCCACGTCT GGCGGATGCC GAGTTCTTCT TCAATACCGA CCGTAAAAAA
CGTCTGGAAG ATAACCTGCC GCGCCTGCAA ACCGTGCTGT TCCAGCAACA GCTGGGTACG
CTGCGTGACA AAACTGACCG CATCCAGGCG CTGGCTGGCT GGATTGCTGA ACAGATTGGC
GCTGACGTTA ACCACGCAAC CCGTGCGGGC CTGCTGTCTA AGTGTGACCT GATGACCAAC
ATGGTCTTCG AGTTCACCGA CACCCAAGGC GTTATGGGGA TGCACTACGC GCGTCACGAT
GGCGAAGCGG AAGACGTAGC CGTCGCGCTG AATGAGCAGT ATCAGCCGCG CTTTGCCGGT
GATGACCTGC CGTCCAACCC GGTAGCTTGT GCGCTGGCGA TTGCTGATAA GATGGATACT
CTGGCGGGTA TCTTCGGTAT CGGTCAGCAT CCGAAAGGCG ACAAAGACCC GTTTGCGCTG
CGTCGTGCCG CACTTGGCGT GCTGCGAATT ATCGTTGAGA AGAACCTCAA CCTTGATCTG
CAAACGCTGA CCGAAGAAGC AGTGCGTCTG TATGGCGATA AGCTGACTAA CGCCAACGTG
GTTGATGATG TTATCGACTT TATGCTCGGT CGCTTCCGCG CCTGGTATCA GGACGAAGGT
TACACCGTTG ACACCATCCA GGCGGTACTG GCGCGTCGTC CGACTCGTCC GGCTGATTTC
GATGCCCGTA TGAAAGCGGT ATCGCATTTC CGTACCCTGG ATGCAGCTGC TGCACTGGCG
GCGGCGAACA AACGTGTATC TAACATTCTG GCGAAATCTG ACGAAGTGCT GAGCGACCGC
GTGAATGCCT CTACCCTGAA AGAGCCGGAA GAAATTAAAC TGGCGATGCA GGTTGTGGTG
CTACGTGACA AGCTGGAGCC GTACTTTGCG GAAGGTCGTT ACCAGGATGC GCTGGTCGAA
CTGGCAGAGC TGCGTGAGCC GGTTGATGCT TTCTTCGATA AAGTGATGGT CATGGTTGAT
GACAAAGAAT TGCGTCTCAA CCGTCTGACC ATGCTGGAGA AACTGCGCGA ACTGTTCCTG
CGCGTTGCGG ATATTTCGCT GTTGCAGTAA
|
|---|
| Protein sequence | MSEKTFLVEI GTEELPPKAL RSLAESFAAN FTVELDNAGL AHGTVQWFAA PRRLTLKVAN
LAEAQPDREI EKRGPAIAQA FDAEGKPSKA AEGWARGCGI TVDQAERLTT DKGEWLLYRA
HVKGESTEAL LPNMVATSLA KLPIPKLMRW GASDVHFVRP VHTVTLLLGD KVIPATILGI
QSDRVIRGHR FMGEPEFTID NADQYPEILR ERGKVIADYE ERKAKIKADA EEAARKIGGN
ADLSESLLEE VASLVEWPVV LTAKFEEKFL AVPAEALVYT MKGDQKYFPV YANDGKLLPN
FIFVANIESK DPQQIISGNE KVVRPRLADA EFFFNTDRKK RLEDNLPRLQ TVLFQQQLGT
LRDKTDRIQA LAGWIAEQIG ADVNHATRAG LLSKCDLMTN MVFEFTDTQG VMGMHYARHD
GEAEDVAVAL NEQYQPRFAG DDLPSNPVAC ALAIADKMDT LAGIFGIGQH PKGDKDPFAL
RRAALGVLRI IVEKNLNLDL QTLTEEAVRL YGDKLTNANV VDDVIDFMLG RFRAWYQDEG
YTVDTIQAVL ARRPTRPADF DARMKAVSHF RTLDAAAALA AANKRVSNIL AKSDEVLSDR
VNASTLKEPE EIKLAMQVVV LRDKLEPYFA EGRYQDALVE LAELREPVDA FFDKVMVMVD
DKELRLNRLT MLEKLRELFL RVADISLLQ
|
|---|
| |