| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3950 |
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| Symbol | avtA |
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| ID | 6268965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3682798 |
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| End bp | 3684051 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641727799 |
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| Product | valine--pyruvate transaminase |
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| Protein accession | YP_001882232 |
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| Protein GI | 187730702 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTCT CCCTTTTTGG TGACAAATTT ACCCGCCACT CCGGCATTAC GCTGCTGATG
GAAGATCTGA ACGACGGTTT ACGCACGCCT GGCGCGATTA TGCTCGGCGG CGGTAATCCG
GCGCAGATCC CGGAAATGCA GGACTACTTC CAGACGCTAC TCACCGACAT GCTGGAAAGT
GGCAAAGCGA CTGATGCACT GTGTAACTAC GACGGTCCAC AGGGGAAAAC GGAGCTACTC
ACACTGCTTG CCGGAATGCT GCGCGAGAAG TTGGGTTGGG ATATCGAACC ACAGAATATT
GCACTAACAA ACGGCAGCCA GAGCGCGTTT TTCTACTTAT TTAACCTGTT TGCCGGACGC
CGTGCCGATG GTCGGGTCAA AAAAGTGCTG TTCCCGCTGG CACCGGAATA CATTGGCTAC
GCTGACGCCG GACTGGAAGA AGATCTGTTT GTCTCTGCGC GTCCGAATAT TGAACTGCTG
CCGGAAGGCC AGTTTAAATA CCACGTCGAT TTTGAGCATC TGCATATTGG CGAAGAAACC
GGGATGATTT GCGTCTCCCG GCCGACGAAT CCAACAGGCA ATGTGATTAC TGACGAAGAG
TTGCTGAAGC TTGACGCGCT GGCGAATCAA CACGGCATTC CGCTGGTGAT TGATAACGCT
TATGGCGTCC CGTTCCCGGG TATCATCTTC AGTGAAGCGC GCCCGCTATG GAATCCGAAT
ATCGTGCTGT GCATGAGTCT TTCCAAGCTG GGGCTGCCTG GCTCCCGCTG CGGCATTATC
ATCGCCAATG AAAAAATCAT CACTGCCATC ACCAATATGA ACGGCATTAT CAGCCTGGCA
CCTGGCGGTA TTGGTCCGGC GATGATGTGT GAAATGATTA AGCGTAACGA TCTGCTGCGC
CTGTCTGAAA CAGTCATCAA ACCGTTTTAC TACCAGCGTG TTCAGGAAAC TATCGCCATC
ATTCGCCGCT ATTTACCGGA AAATCGCTGC CTGATTCATA AACCGGAAGG AGCCATTTTC
CTCTGGCTAT GGTTTAAGGA TTTGCCCATT ACGACCGAGC AGCTCTATCA GCGCCTGAAA
GCACGCGGCG TGCTGATGGT GCCGGGGCAC AACTTCTTCC CGGGACTGGA TAAACCGTGG
CCGCATACGC ATCAATGTAT GCGCATGAAC TACGTACCAG AGCCGGAGAA AATTGAGGCG
GGGGTGAAGA TTCTGGCGGA AGAGATAGAA AGAGCCTGGG CAGAAAGTCA CTAA
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| Protein sequence | MTFSLFGDKF TRHSGITLLM EDLNDGLRTP GAIMLGGGNP AQIPEMQDYF QTLLTDMLES
GKATDALCNY DGPQGKTELL TLLAGMLREK LGWDIEPQNI ALTNGSQSAF FYLFNLFAGR
RADGRVKKVL FPLAPEYIGY ADAGLEEDLF VSARPNIELL PEGQFKYHVD FEHLHIGEET
GMICVSRPTN PTGNVITDEE LLKLDALANQ HGIPLVIDNA YGVPFPGIIF SEARPLWNPN
IVLCMSLSKL GLPGSRCGII IANEKIITAI TNMNGIISLA PGGIGPAMMC EMIKRNDLLR
LSETVIKPFY YQRVQETIAI IRRYLPENRC LIHKPEGAIF LWLWFKDLPI TTEQLYQRLK
ARGVLMVPGH NFFPGLDKPW PHTHQCMRMN YVPEPEKIEA GVKILAEEIE RAWAESH
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