Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3948 |
Symbol | |
ID | 6271035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3681260 |
End bp | 3682072 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641727797 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_001882230 |
Protein GI | 187730510 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAGG AAAAAGAGCG TCCAGCCGGA AGCCAGAGTC TGTTTCGCGG GTTGATGCTG ATTGAGATTT TGAGCAACTA TCCAAACGGT TGTCCGTTGG CGCATCTTTC GGAGCTGGCT GGTTTAAATA AGAGTACCGT CCATCGCTTA TTGCAGGGAT TACAGTCCTG CGGCTATGTG ACCACCGCGC CCGCCGCAGG GAGTTACCGC CTGACTACCA AATTTATTGC CGTCGGGCAG AAGGCGCTGT CTTCGCTGAA TATCATTCAT ATCGCCGCTC CGCATCTTGA GGCACTGAAC ATCGCCACTG GTGAAACCAT TAACTTCTCC AGCCGCGAAG ACGATCACGC TATTTTGATT TATAAGCTGG AACCCACAAC CGGGATGCTG CGAACCCGTG CCTATATTGG CCAGCATATG CCGCTCTACT GTTCCGCAAT GGGCAAGATC TACATGGCGT TTGGTCACCC GGACTACGTG AAGTCATACT GGGAAAACCA TCAGCATGAG ATCCAGCCGT TAACCCGCAA TACCATTACC GAGCTGCCCG CGATGTTCGA CGAACTGGCG CACATTCGTG AAAGCGGAGC GGCGATGGAC GGAGAAGAAA ACGAACTCGG CGTCTCCTGT ATTGCTGTTC CGGTGTTTGA TATTCATGGG CGGGTGCCGT ACGCCGTGTC GATTTCGCTT TCGACATCAC GTCTGAAACA GGTGGGAGAG AAAAATCTCC TGAAACCACT GCGTGAAACC GCGCAGGCTA TTTCTAATGA ACTGGGATTT ACTGTCAGGG ATGACCTGGG CGCGATCACA TAA
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Protein sequence | MAQEKERPAG SQSLFRGLML IEILSNYPNG CPLAHLSELA GLNKSTVHRL LQGLQSCGYV TTAPAAGSYR LTTKFIAVGQ KALSSLNIIH IAAPHLEALN IATGETINFS SREDDHAILI YKLEPTTGML RTRAYIGQHM PLYCSAMGKI YMAFGHPDYV KSYWENHQHE IQPLTRNTIT ELPAMFDELA HIRESGAAMD GEENELGVSC IAVPVFDIHG RVPYAVSISL STSRLKQVGE KNLLKPLRET AQAISNELGF TVRDDLGAIT
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