Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3898 |
Symbol | |
ID | 6272986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3625936 |
End bp | 3626286 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641727753 |
Product | IS66 family transposase orfB |
Protein accession | YP_001882187 |
Protein GI | 187734232 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTCAC ACCCGTCAGG CACCCGCATC TGGCTCGTTG CTGGGATAAC CGATATGCGT AAGTCTTTCA ACGGGCTGGG TGAACAGGTA CAGCATGTGC TGAATGATAA TCCCTTCTCC GGTCACCTGT TCATCTTCCG TGGCCGACGG GGTGACATGA TTAAAATCCT GTGGGCTGAT GCTGATGGTC TGTGCCTGTT CACCAGACGC CTGGAGGAAG GCCAGTTTAT CTGGCCTGCT GTGCGTGACG GCAAGGTATC CATTACCCGC TCACAACTGG CAATGCTCCT CGATAAGCTG GACTGGCGTC AGCCAAAAAC ATCCCGCCTT AACGCACTGA CAATGTTGTA A
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Protein sequence | MISHPSGTRI WLVAGITDMR KSFNGLGEQV QHVLNDNPFS GHLFIFRGRR GDMIKILWAD ADGLCLFTRR LEEGQFIWPA VRDGKVSITR SQLAMLLDKL DWRQPKTSRL NALTML
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