Gene SbBS512_E3891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3891 
Symbolasd 
ID6272274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp3614313 
End bp3615416 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content54% 
IMG OID641727746 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001882180 
Protein GI187734251 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG TTGGTTTTAT CGGCTGGCGC GGTATGGTCG GCTCCGTTCT CATGCAACGC 
ATGGTTGAAG AGCGCGACTT CAACGCCATT CGCCCTGTCT TCTTTTCTAC TTCTCAGCTT 
GGCCAGGCTG CGCCGTCTTT TGGCGGAACC ACTGGCACAC TTCAGGATGC CTTTGATCTG 
GAGGCGCTAA AGGCCCTCGA TATCATTGTG ACCTGTCAGG GCGGCGATTA TACCAACGAA 
ATCTATCCAA AGCTTCGTGA AAGCGGATGG CAAGGTTACT GGATTGACGC AGCATCGTCT 
CTGCGCATGA AAGATGACGC CATCATCATT CTTGACCCCG TCAATCAGGA CGTCATTACC 
GACGGATTAA ATAATGGCAT CAGGACTTTT GTTGGCGGTA ACTGTACCGT AAGCCTGATG 
TTGATGTCGT TGGGTGGTTT ATTCGCCAAT GATCTTGTTG ATTGGGTGTC CGTTGCAACC 
TACCAGGCCG CTTCCGGCGG TGGTGCGCGA CATATGCGTG AGTTATTAAC CCAGATGGGC 
CATCTGTATG GCCATGTGGC AGATGAACTC GCGACCCCGT CCTCTGCTAT TCTCGATATC 
GAACGCAAAG TCACAACCTT AACCCGTAGC GGTGAGCTGC CGGTGGATAA CTTTGGCGTG 
CCGCTGGCGG GTAGCCTGAT TCCGTGGATC GACAAACAGC TCGATAACGG TCAGAGCCGC 
GAAGAGTGGA AAGGGCAGGC GGAAACCAAC AAGATCCTCA ACACATCTTC CGTAATTCCG 
GTAGATGGTT TATGTGTGCG TGTCGGGGCA TTGCGCTGCC ACAGCCAGGC ATTCACTATT 
AAATTGAAAA AAGATGTGTC TATTCCGACC GTCGAAGAAC TGCTGGCTGC GCACAATCCG 
TGGGCGAAAG TCGTTCCGAA CGATCGGGAA ATCACTATGC GTGAGCTAAC CCCAGCTGCC 
GTTACCGGCA CGCTGACCAC GCCGGTAGGC CGCCTGCGTA AGCTGAATAT GGGACCGGAG 
TTCCTGTCAG CCTTTACCGT GGGTGACCAG CTGCTGTGGG GGGCCGCGGA GCCGCTGCGT 
CGGATGCTTC GTCAACTGGC GTAA
 
Protein sequence
MKNVGFIGWR GMVGSVLMQR MVEERDFNAI RPVFFSTSQL GQAAPSFGGT TGTLQDAFDL 
EALKALDIIV TCQGGDYTNE IYPKLRESGW QGYWIDAASS LRMKDDAIII LDPVNQDVIT 
DGLNNGIRTF VGGNCTVSLM LMSLGGLFAN DLVDWVSVAT YQAASGGGAR HMRELLTQMG 
HLYGHVADEL ATPSSAILDI ERKVTTLTRS GELPVDNFGV PLAGSLIPWI DKQLDNGQSR 
EEWKGQAETN KILNTSSVIP VDGLCVRVGA LRCHSQAFTI KLKKDVSIPT VEELLAAHNP 
WAKVVPNDRE ITMRELTPAA VTGTLTTPVG RLRKLNMGPE FLSAFTVGDQ LLWGAAEPLR 
RMLRQLA