| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3889 |
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| Symbol | gntU |
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| ID | 6272886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3612131 |
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| End bp | 3613471 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641727744 |
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| Product | low affinity gluconate transporter |
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| Protein accession | YP_001882178 |
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| Protein GI | 187731220 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTACAT TAACGCTTGT TTTAACAGCA GTAGGGTCTG TTTTACTGCT GCTGTTTTTA
GTCATGAAGG CGCGTATGCA CGCTTTCCTG GCTTTGATGG TGGTGTCCAT GGGGGCTGGC
CTTTTTTCCG GTATGCCGCT CGATAAAATC GCAGCGACGA TGGAAAAAGG GATGGGAGGC
ACCCTCGGCT TCCTGGCGGT GGTTGTCGCC CTGGGAGCTA TGTTTGGCAA GATCTTACAT
GAAACCGGCG CAGTCGATCA GATTGCCGTC AAAATGCTCA AATCCTTCGG TCACAGCCGC
GAGCATTATG CCATCGGCCT TGCGGGGTTG GTCTGTGCGC TACCGCTGTT CTTTGAAGTG
GCGATAGTTC TGCTGATTAG CGTTGCTTTC TCAATGGCGC GCCACACCGG TACGAACCTG
GTGAAGCTGG TAATCCCATT ATTCGCAGGC GTGGCGGCAG CGGCGGCATT TCTGGTGCCT
GGACCAGCGC CGATGCTGCT GGCATCGCAG ATGAATGCCG ACTTTGGCTG GATGATCCTG
ATTGGTCTGT GTGCGGCAAT TCCGGGAATG ATTATTGCCG GGCCGCTGTG GGGTAATTTC
ATCAGCCGTT ACGTGGAGTT GCATATTCCT GACGACATCA GCGAACCGCA TCTCGGCGAA
GGCAAAATGC CGTCCTTCGG ATTCAGCCTG TCGCTGATCC TGTTGCCGCT GGTGCTGGTG
GGGCTGAAAA CCATTGCCGC TCGTTTTGTG CCAGAAGGAT CAACTGCTTA CGAATGGTTC
GAGTTTATTG GTCATCCATT TACCGCGATT CTGGTTGCTT GTCTGGTAGC GATTTATGGC
CTGGCAATGC GTCAGGGCAT GCCAAAAGAC AAAGTGATGG AGATTTGCGG TCACGCGCTA
CAACCGGCGG GGATCATTCT GCTGGTGATT GGTGCAGGCG GCGTGTTCAA ACAGGTGCTG
GTTGACTCTG GCGTAGGTCC GGCACTGGGC GAAGCGTTAA CCGGCATGGG CCTGCCGATT
GCTATCACCT GCTTCGTGCT GGCCGCTGCA GTGCGCATCA TTCAGGGGTC TGCCACCGTT
GCCTGTTTAA CGGCGGTGGG GCTGGTGATG CCGGTCATTG AACAACTGAA CTACTCCGGT
GCGCAAATGG CGGCACTGTC GATTTGTATC GCTGGTGGTT CGATTGTTGT CAGCCACGTT
AACGACGCCG GTTTCTGGTT GTTCGGTAAA TTTACCGGCG CGACCGAAGC CGAAACGCTG
AAAACCTGGA CCATGATGGA AACCATCCTC GGCACTGTTG GTGCCATCGT TGGGATGATT
GCGTTCCAGC TGTTGAGTTA A
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| Protein sequence | MTTLTLVLTA VGSVLLLLFL VMKARMHAFL ALMVVSMGAG LFSGMPLDKI AATMEKGMGG
TLGFLAVVVA LGAMFGKILH ETGAVDQIAV KMLKSFGHSR EHYAIGLAGL VCALPLFFEV
AIVLLISVAF SMARHTGTNL VKLVIPLFAG VAAAAAFLVP GPAPMLLASQ MNADFGWMIL
IGLCAAIPGM IIAGPLWGNF ISRYVELHIP DDISEPHLGE GKMPSFGFSL SLILLPLVLV
GLKTIAARFV PEGSTAYEWF EFIGHPFTAI LVACLVAIYG LAMRQGMPKD KVMEICGHAL
QPAGIILLVI GAGGVFKQVL VDSGVGPALG EALTGMGLPI AITCFVLAAA VRIIQGSATV
ACLTAVGLVM PVIEQLNYSG AQMAALSICI AGGSIVVSHV NDAGFWLFGK FTGATEAETL
KTWTMMETIL GTVGAIVGMI AFQLLS
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