Gene SbBS512_E3886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3886 
Symbol 
ID6272166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp3609547 
End bp3610242 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content52% 
IMG OID641727741 
Productpirin family protein 
Protein accessionYP_001882175 
Protein GI187731233 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.688116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTACT TACGCAAAGC AAATGAACGT GGTCATGCAA ATCATGGCTG GCTGGATTCC 
TGGCATACTT TCTCTTTTGC CAACTATTAC GATCCGAACT TTATGGGCTT CTCCGCGCTG 
CGCGTGATTA ACGACGACGT GATTGAAGCA GGGCAGGGCT TCGGCACTCA CCCGCATAAA 
GATATGGAAA TTTTGACCTA CGTGCTGGAA GGTACTGTTG AGCATCAGGA CAGCATGGGC 
AATAAAGAGC AGGTTCCGGC GGGTGAGTTC CAGATTATGA GTGCGGGTAC GGGTATTCGT 
CACTCAGAGT ACAACCCAAG CAGCACCGAG CGTCTGCATC TGTATCAGAT CTGGATCATG 
CCTGAAGAAA ACGGTATTAC GCCGCGTTAT GAACAGCGTC GCTTCGATGC CGTACAGGGC 
AAACAGCTGG TGCTCTCGCC GGATGCGCGA GATGGTTCAT TGAAAGTGCA TCAGGATATG 
GAACTGTACC GCTGGGCGTT GCTGAAAGAT GAGCAGTCGG TGCATCAGAT TGCCGCTGAA 
CGCCGCGTCT GGATCCAGGT GGTGAAAGGC AATGTCACCA TTAACGGCGT GAAAGCCTCG 
ACCAGCGATG GTCTGGCAAT CTGGGATGAG CAGGCAATCT CCATCCATGC GGATAGCGAC 
AGCGAAGTGT TACTGTTCGA TCTGCCGCCG GTTTAA
 
Protein sequence
MIYLRKANER GHANHGWLDS WHTFSFANYY DPNFMGFSAL RVINDDVIEA GQGFGTHPHK 
DMEILTYVLE GTVEHQDSMG NKEQVPAGEF QIMSAGTGIR HSEYNPSSTE RLHLYQIWIM 
PEENGITPRY EQRRFDAVQG KQLVLSPDAR DGSLKVHQDM ELYRWALLKD EQSVHQIAAE 
RRVWIQVVKG NVTINGVKAS TSDGLAIWDE QAISIHADSD SEVLLFDLPP V