| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3883 |
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| Symbol | |
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| ID | 6270972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3606242 |
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| End bp | 3607441 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641727737 |
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| Product | HNH endonuclease domain protein |
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| Protein accession | YP_001882172 |
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| Protein GI | 187730622 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA TTGTTTACCT GACAGTAACG GGAGAACAAC AAGGAAGCAT CTCCGCAGGT
TGTGGGACTT CTGAGTCTAC AGGTAATCGT TGGCAGAGCG GGCATGAGGA TGAAATATTT
ACATTCTCAC TCTTAAATAA TATTAATAAT ACGGGGCTTG GTTCACAGTT CCATGGTATA
ACATTTTGTA AATTAATTGA TAAAAGCACT CCATTATTTA TTAATTCCAT TAACAATAAT
GAACAATTAT TTATGGGATT TGACTTCTAT CGAATAAATA GATTTGGTAG ATTGGAAAAG
TATTATTATA TACAACTAAG AGGCGCTTTT TTATCGGCTA TTCATCACCA GATCATTGAA
AACCAACTGG ATACAGAAAC AATAACTATT AGTTATGAAT TTATCCTCTG TCAACATCTT
ATCGCAAATA CCGAGTTCAG CTATTTGGCA CTCCCTGAAA ATTATAACCG TTTGTTTTTA
CCAAATTCAA AAAACCAAAC AAATAATCGT TTCAAAACGT TAAACAGCAA AGCTATTGGC
AGGCTACTTG CTGCTGGTGG CGTATACAAT GGGAACATTG AAGGATTCAG AGATACTGCG
GAAAAACTGG GTGGAGATGC AATAAAAGGC TATGATCAAA TACTAAATGA AAAAACAGCG
GGCATAGCGA TAGCAACAGC ATCTATTCTT TTAACAAAGC GTTCTAATGT TGATACATAT
ACAGAAATAA ATAGTTACTT AGGCAAACTT AGAGGTCAAC AAAAACTTCT TGATGGTATA
GACATAATAG AAATAATATA CATTAAGAGA CCTTCAAAAG ACTTAGCTAA CTTACGAAAG
GAGTTTAATA AAACTGTAAG AAAAAATTTT CTTATCAAAC TTGCAAAAAC CTCCGAAGCA
TCTGGAAGAT TCAACGCCGA AGACCTTTTA AGAATGAGAA AGGGCAATGT TCCTCTAAAT
TATAATGTTC ACCATAAACT ATCTCTAGAT GATGGTGGTA CTAATGATTT CGAAAATTTA
GTATTAATCG AAAACGAACC ATATCATAAA GTTTTTACTA ACATGCAATC ACGAATAGCT
AAGGGAATAT TAGTAGGTGA AAGCAAAATC ACTCCCTGGG CCATTCCATC TGGCTCAATT
TATCCTCCCA TGAAAAATGT AATGAACGCA TCCCACACAA TTAAACACGG AGCAGTATGA
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| Protein sequence | MSNIVYLTVT GEQQGSISAG CGTSESTGNR WQSGHEDEIF TFSLLNNINN TGLGSQFHGI
TFCKLIDKST PLFINSINNN EQLFMGFDFY RINRFGRLEK YYYIQLRGAF LSAIHHQIIE
NQLDTETITI SYEFILCQHL IANTEFSYLA LPENYNRLFL PNSKNQTNNR FKTLNSKAIG
RLLAAGGVYN GNIEGFRDTA EKLGGDAIKG YDQILNEKTA GIAIATASIL LTKRSNVDTY
TEINSYLGKL RGQQKLLDGI DIIEIIYIKR PSKDLANLRK EFNKTVRKNF LIKLAKTSEA
SGRFNAEDLL RMRKGNVPLN YNVHHKLSLD DGGTNDFENL VLIENEPYHK VFTNMQSRIA
KGILVGESKI TPWAIPSGSI YPPMKNVMNA SHTIKHGAV
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