Gene SbBS512_E3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3872 
Symbol 
ID6269164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3597369 
End bp3598214 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content54% 
IMG OID641727728 
Productglycerol-3-phosphate transporter membrane protein 
Protein accessionYP_001882163 
Protein GI187733811 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGA ACCGTCCGTG GCTGACGATA TTCAGCCATA CCATGCTGAT CCTCGGGATC 
GCGGTGATCC TCTTCCCGCT GTACGTGGCG TTTGTCGCGG CGACGCTGGA TAAACAGGCC
GTCTATGCCG CGCCGATGAC GCTCATCCCC GGCACACATC TGCTGGAAAA TATCCACAAC
ATCTGGGTTA ACGGGGTAGG TACGAATAGC GCGCCGTTCT GGCGGATGTT GCTTAACAGC
TTTGTGATGG CGTTCAGCAT TACGCTCGGC AAAATTACCG TCTCGATGCT CTCGGCATTT
GCCATTGTCT GGTTTCGTTT TCCGCTACGT AACCTCTTCT TCTGGATGAT TTTTATCACC
CTGATGCTGC CGGTTGAAGT ACGTATCTTC CCGACGGTGG AAGTCATCGC CAACCTGAAG
ATGCTCGACA GCTACGCCGG TTTAACGCTG CCGCTGATGG CCTCGGCGAC CGCCACGTTT
CTGTTTCGCC AGTTCTTTAT GACGCTGCCG GATGAACTGG TGGAAGCGGC GCGGATCGAC
GGCGCATCGC CAATGCGCTT CTTTTGCGAC ATCGTTTTTC CGCTCTCCAA AACTAATCTG
GCGGCGCTGT TTGTGATCAC CTTTATTTAC GGCTGGAACC AGTATTTGTG GCCGTTGTTG
ATTATTACCG ACGTGGATCT CGGCACCACC GTGGCAGGGA TCAAAGGGAT GATCGCCACT
GGCGAAGGCA CCACGGAATG GAACTCAGTG ATGGCGGCGA TGTTGTTAAC CCTGATCCCA
CCAGTAGTGA TTGTTTTAGT GATGCAGCGT GCCTTCGTGC GCGGCCTGGT CGATAGTGAG
AAATAA
 
Protein sequence
MIENRPWLTI FSHTMLILGI AVILFPLYVA FVAATLDKQA VYAAPMTLIP GTHLLENIHN 
IWVNGVGTNS APFWRMLLNS FVMAFSITLG KITVSMLSAF AIVWFRFPLR NLFFWMIFIT
LMLPVEVRIF PTVEVIANLK MLDSYAGLTL PLMASATATF LFRQFFMTLP DELVEAARID
GASPMRFFCD IVFPLSKTNL AALFVITFIY GWNQYLWPLL IITDVDLGTT VAGIKGMIAT
GEGTTEWNSV MAAMLLTLIP PVVIVLVMQR AFVRGLVDSE K