Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3871 |
Symbol | ugpA |
ID | 6270957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3596485 |
End bp | 3597372 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641727727 |
Product | glycerol-3-phosphate transporter permease |
Protein accession | YP_001882162 |
Protein GI | 187733456 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCAT CCCGTCCGGT GTTCCGCTCG CGCTGGCTGC CTTATCTGCT GGTCGCGCCG CAGCTCATCA TCACCGTTAT CTTTTTTATC TGGCCTGCGG GCGAAGCGTT GTGGTACTCG CTGCAAAGCG TCGATCCGTT TGGTTTCTCC AGCCAGTTTG TCGGTCTGGA TAACTTCGTC ACGCTGTTCC ATGACAGCTA CTATCTAGAC TCCTTCTGGA CGACGATAAA ATTCAGCACC TTTGTCACCG TCAGCGGTTT GCTGGTATCG CTGTTCTTTG CGGCGCTGGT GGAGTACATC GTGCGCGGCA GCCGTTTCTA TCAAACCTTG ATGCTGCTGC CGTATGCCGT GGCTCCCGCC GTTGCCGCCG TATTGTGGAT CTTCCTGTTT AACCCCGGTC GCGGGCTGAT CACCCATTTT CTCGCTGAGT TCGGCTACGA CTGGAACCAC GCGCAAAACA GCGGTCAGGC AATGTTTCTG GTGGTGTTTG CCTCGGTGTG GAAGCAAATC AGCTACAACT TTCTGTTCTT CTATGCCGCG CTGCACTCCA TTCCCCGTTC GTTGATCGAA GCCGCAGCCA TCGACGGTGC AGGGCCGATT CGCCGCTTCT TTAAGATTGC GCTGCCGCTT ATCGCCCCGG TGAGTTTCTT CCTGCTGGTA GTGAACCTGG TGTATGCCTT CTTCGACACC TTCCCGGTGA TCGACGCCGC CACGTCCGGC GGGCCGGTTC AGGCCACCAC GACGCTGATT TATAAGATCT ACCGCGAAGG TTTTACCGGA CTGGATCTGG CTTCGTCTGC CGCACAGTCG GTGGTGTTGA TGTTCCTCGT CATCGTGCTG ACGGTGGTGC AGTTCCGCTA TGTTGAAAGC AAGGTGCGTT ACCAATGA
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Protein sequence | MSSSRPVFRS RWLPYLLVAP QLIITVIFFI WPAGEALWYS LQSVDPFGFS SQFVGLDNFV TLFHDSYYLD SFWTTIKFST FVTVSGLLVS LFFAALVEYI VRGSRFYQTL MLLPYAVAPA VAAVLWIFLF NPGRGLITHF LAEFGYDWNH AQNSGQAMFL VVFASVWKQI SYNFLFFYAA LHSIPRSLIE AAAIDGAGPI RRFFKIALPL IAPVSFFLLV VNLVYAFFDT FPVIDAATSG GPVQATTTLI YKIYREGFTG LDLASSAAQS VVLMFLVIVL TVVQFRYVES KVRYQ
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