| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3868 |
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| Symbol | livF |
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| ID | 6273058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3593949 |
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| End bp | 3594674 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641727724 |
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| Product | leucine/isoleucine/valine transporter ATP-binding subunit |
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| Protein accession | YP_001882159 |
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| Protein GI | 187731474 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGGCATA AGATGGAAAA AGTCATGTTG TCCTTTGACA AAGTCAGCGC CCACTACGGC
AAAATCCAGG CGCTGCATGA GGTGAGCCTG CATATCAATC AGGGCGAGAT TGTCACGCTG
ATTGGCGCGA ACGGGGCGGG GAAAACCACC TTGCTCGGCA CGTTATGCGG CGATCCGCGC
GCCGCCAGCG GGCGAATTGT GTTTGATGAT AAAGACATTA CCGACTGGCA GACGGCGAAA
ATCATGCGCG AAGCGGTAGC GATTGTCCCG GAAGGGCGTC GCGTCTTCTC GCGGATGACG
GTGGAAGAGA ACCTGGCGAT GGGCGGCTTT TTTGCCGAAC GCGACCAGTT CCAGGAGCGC
ATAAAGTGGG TGTATGAACT GTTTCCACGT CTGCATGAGC GCCGTGTTCA GCGGGCAGGC
ACCATGTCCG GCGGTGAGCA ACAAATGCTG GCGATTGGTC GCGCGCTGAT GAGCAACCCG
CGTTTGCTGC TACTTGATGA GCCATCGCTC GGTCTTGCGC CGATTATCAT CCAGCAAATT
TTCGACACCA TCGAGCAGCT GCGCGAGCAG GGGATGACTA TCTTCCTCGT CGAGCAGAAC
GCCAACCAGG CGCTAAAGCT GGCGGATCGC GGCTACGTGC TGGAAAACGG CCATGTGGTG
CTCTCCGATA CCGGCGACGC GCTGCTGGCG AACGAGGCAG TGAGAAGTGC GTATTTAGGC
GGGTAA
|
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| Protein sequence | MRHKMEKVML SFDKVSAHYG KIQALHEVSL HINQGEIVTL IGANGAGKTT LLGTLCGDPR
AASGRIVFDD KDITDWQTAK IMREAVAIVP EGRRVFSRMT VEENLAMGGF FAERDQFQER
IKWVYELFPR LHERRVQRAG TMSGGEQQML AIGRALMSNP RLLLLDEPSL GLAPIIIQQI
FDTIEQLREQ GMTIFLVEQN ANQALKLADR GYVLENGHVV LSDTGDALLA NEAVRSAYLG
G
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