Gene SbBS512_E3854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3854 
Symbol 
ID6271882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp3581010 
End bp3581636 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content56% 
IMG OID641727710 
Producthypothetical protein 
Protein accessionYP_001882145 
Protein GI187731292 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.85502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTGGT CGTTTATCGC TGTCTGTCTT TCCGCATGGC TATCTGTGGA TGCATCGTAT 
CGTGGGCCAA CCTGGCAACG CTGGGTGTTT AAACCGTTAA CCCTTCTTCT CCTGCTGTTA 
CTGGCCTGGC AAGCGCCGAT GTTCGACGCC ATTAGCTATC TGGTGCTGGC AGGGCTGTGC 
GCCTCACTGC TGGGCGATGC GCTAACCCTG TTGCCACGTC AACGTCTGAT GTACGCCATC 
GGCGCGTTTT TCCTCTCGCA CCTGCTGTAC ACCATCTATT TCGCCAGTCA GATGACGCTC 
TCTTTCTTCT GGCCTCTGCC ACTGGTGTTG CTGGTTCTGG GTGCGCTGTT ACTGGCGATT 
ATCTGGACGC GGCTGGAAGA GTATCGTTGG CCTATCTGCA CGTTTATCGG CATGACGCTG 
GTGATGGTGT GGCTGGCAGG TGAACTGTGG TTCTTCCGTC CGACCGCTCC GGCGCTCTCT 
GCGTTTGTTG GCGCTTCGTT GCTGTTTATC AGTAACTTTG TCTGGCTGGG GAGCCACTAT 
CGCCGACGCT TCCGTGCGGA TAACGCGATT GCTGCGGCCT GCTACTTTGC CGGTCACTTC 
CTCATCGTCC GCTCACTGTA TCTCTGA
 
Protein sequence
MLWSFIAVCL SAWLSVDASY RGPTWQRWVF KPLTLLLLLL LAWQAPMFDA ISYLVLAGLC 
ASLLGDALTL LPRQRLMYAI GAFFLSHLLY TIYFASQMTL SFFWPLPLVL LVLGALLLAI 
IWTRLEEYRW PICTFIGMTL VMVWLAGELW FFRPTAPALS AFVGASLLFI SNFVWLGSHY 
RRRFRADNAI AAACYFAGHF LIVRSLYL