Gene SbBS512_E3819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3819 
SymbolarsB 
ID6269073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3544892 
End bp3546181 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content53% 
IMG OID641727677 
Productarsenical pump membrane protein 
Protein accessionYP_001882112 
Protein GI187733950 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID[TIGR00935] arsenical pump membrane protein 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACTGG CAGGCGCTAT CTTTGTCCTG ACCATTGTAT TGGTTATCTG GCAGCCGAAA 
GGTTTAGGCA TCGGCTGGAG TGCAACGCTC GGCGCAGTAC TGGCGTTAGT TACGGGCGTG
GTCCATCCGG GTGATATTCC GGTGGTGTGG AATATCGTCT GGAACGCGAC GGCTGCGTTT
ATTGCCGTCA TTATCATCAG CCTGCTGCTG GATGAGTCCG GCTTTTTTGA ATGGGCGGCG
CTGCACGTCT CACGCTGGGG TAATGGTCGT GGTCGCTTGC TGTTTACCTG GATTGTCCTG
CTCGGTGCTG CCGTTGCCGC CCTGTTTGCC AATGATGGCG CAGCGCTTAT TTTGACGCCG
ATTGTCATCG CCATGCTGCT GGCTTTAGGA TTCAGTAAAG GCACGACGCT GGCGTTCGTG
ATGGCGGCCG GATTCATTGC CGATACCGCC AGCCTGCCGC TTATTGTCTC CAACTTGGTG
AATATCGTTT CCGCTGATTT CTTTGGCCTC GGCTTTCGCG AATACGCCTC GGTGATGGTG
CCGGTGGATA TCGCCGCGAT TGTTGCCACG CTGGTGATGC TACATCTCTA TTTTCGCAAA
GATATTCCGC AGAACTACGA TATGGCGCTG CTGAAATCTC CCGCAGAAGC GATCAAAGAT
CCTGCTACGT TCAAAACTGG CTGGGTTGTT TTACTGCTTC TGCTGGTGGG ATTTTTCGTC
CTGGAACCGC TCGGCATTCC GGTGAGCGCC ATTGCAGCTG TGGGCGCGCT GATATTATTT
GTCGTCGCTA AACGCGGTCA TGCGATTAAT ACGGGTAAAG TCCTGCGCGG TGCCCCCTGG
CAAATTGTCA TCTTCTCGCT CGGCATGTAT CTGGTGGTTT ATGGCCTGCG CAATGCCGGA
TTAACGGAAT ATCTTTCTGG CGTACTCAAC GTGCTGGCGG ATAACGGCCT GTGGGCCGCG
ATGCTCGGCA CCGGATTCCT CACAGCCTTC CTCTCTTCTA TTATGAACAA TATGCCGACG
GTACTGGTTG GCGCGTTGTC CATTGATGGC AGCACGGCAT CTGGCGTTAT CAAAGAAGCG
ATGGTTTATG CCAATGTGAT TGGCTGCGAT TTGGGACCGA AAATTACCCC AATTGGTAGC
CTGGCTACAC TACTCTGGCT GCACGTACTT TCACAGAAGA ATATGACTAT CAGCTGGGGA
TATTACTTCC GTACAGGGAT TATCATGACC CTGCCTGTGC TGTTTGTGAC GCTGGCTGCG
CTGGCGCTAC GTCTCTCTTT CACTTTGTAA
 
Protein sequence
MLLAGAIFVL TIVLVIWQPK GLGIGWSATL GAVLALVTGV VHPGDIPVVW NIVWNATAAF 
IAVIIISLLL DESGFFEWAA LHVSRWGNGR GRLLFTWIVL LGAAVAALFA NDGAALILTP
IVIAMLLALG FSKGTTLAFV MAAGFIADTA SLPLIVSNLV NIVSADFFGL GFREYASVMV
PVDIAAIVAT LVMLHLYFRK DIPQNYDMAL LKSPAEAIKD PATFKTGWVV LLLLLVGFFV
LEPLGIPVSA IAAVGALILF VVAKRGHAIN TGKVLRGAPW QIVIFSLGMY LVVYGLRNAG
LTEYLSGVLN VLADNGLWAA MLGTGFLTAF LSSIMNNMPT VLVGALSIDG STASGVIKEA
MVYANVIGCD LGPKITPIGS LATLLWLHVL SQKNMTISWG YYFRTGIIMT LPVLFVTLAA
LALRLSFTL