Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3804 |
Symbol | glpR |
ID | 6271744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3535653 |
End bp | 3536411 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641727665 |
Product | DNA-binding transcriptional repressor GlpR |
Protein accession | YP_001882100 |
Protein GI | 187731240 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAAA CACAACGTCA CAACGGTATT ATCGAACTGG TTAAACAGCA GGGTTATGTC AGTACTGAAG AGCTGGTAGA GCATTTCTCC GTCAGCCCGC AGACTATTCG CCGCGACCTC AATGAGCTGG CGGAGCAAAA CCTGATCCTG CGTCACCATG GCGGTGCGGC GCTGCCTTCC AGTTCGGTTA ACACGCCGTG GCACGATCGC AAAGCCACCC AGACCGAAGA AAAAGAGAGG ATTGCCCGCA AAGTGGCGGA GCAAATCCCC AACGGCTCGA CACTGTTTAT CGATATCGGC ACCACGCCGG AAGCGGTGGC GCACGCGCTG CTTAATCACA GCAATTTGCG TATTGTCACC AACAATCTCA ATGTTGCTAA CACGTTGATG GTAAAAGAAG ATTTCCGCAT TATTCTCGCC GGTGGCGAAT TACGCAGCCG CGATGGCGGG ATCATTGGCG AAGCGACGCT CGATTTTATC TCCCAGTTCC GCCTTGATTT CGGCATTCTG GGGATAAGCG GCATCGATAG CGACGGCTCG CTGCTGGAGT TCGATTACCA CGAAGTTCGC ACCAAGCGCG CCATTATTGA GAACTCGCGC CACGTTATGC TGGTTGTCGA TCACTCGAAA TTTGGCCGTA ACGCGATGGT CAATATGGGC AGCATCAGCA TGGTAGATGC CGTCTACACC GACGCCCCGC CGCCAGTAAG CGTAATGCAG GTGCTGACGG ACCATCATAT TCAACTGGAG CTGTGCTGA
|
Protein sequence | MKQTQRHNGI IELVKQQGYV STEELVEHFS VSPQTIRRDL NELAEQNLIL RHHGGAALPS SSVNTPWHDR KATQTEEKER IARKVAEQIP NGSTLFIDIG TTPEAVAHAL LNHSNLRIVT NNLNVANTLM VKEDFRIILA GGELRSRDGG IIGEATLDFI SQFRLDFGIL GISGIDSDGS LLEFDYHEVR TKRAIIENSR HVMLVVDHSK FGRNAMVNMG SISMVDAVYT DAPPPVSVMQ VLTDHHIQLE LC
|
| |