| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3784 |
|---|
| Symbol | ompR |
|---|
| ID | 6272178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 3510199 |
|---|
| End bp | 3510918 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641727647 |
|---|
| Product | osmolarity response regulator |
|---|
| Protein accession | YP_001882082 |
|---|
| Protein GI | 187731609 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGA ACTACAAGAT TCTGGTGGTC GATGACGACA TGCGCCTGCG TGCGCTGCTG
GAACGTTATC TCACCGAACA AGGCTTCCAG GTTCGAAGCG TCGCTAATGC AGAACAGATG
GATCGCCTGC TGACTCGTGA ATCTTTCCAT CTTATGGTAC TGGATTTAAT GTTACCTGGT
GAAGATGGCT TGTCGATTTG CCGACGTCTT CGTAGTCAGA GCAACCCGAT GCCGATCATT
ATGGTGACGG CAAAAGGGGA AGAAGTGGAC CGTATCGTAG GCCTGGAGAT TGGCGCTGAC
GACTACATTC CAAAACCGTT TAACCCGCGT GAACTGCTGG CCCGTATTCG TGCGGTGCTG
CGTCGTCAGG CGAACGAACT GCCAGGCGCA CCGTCACAGG AAGAGGCGGT AATTGCTTTC
GGTAAGTTCA AACTTAACCT CGGTACGCGC GAAATGTTCC GCGAAGATGA GCCGATGCCG
CTCACCAGCG GTGAGTTTGC GGTACTGAAG GCACTGGTCA GCCATCCGCG TGAGCCGCTC
TCCCGCGATA AGCTGATGAA CCTTGCCCGT GGTCGTGAAT ATTCCGCAAT GGAACGCTCC
ATCGACGTGC AGATTTCGCG TCTGCGCCGC ATGGTAGAAG AAGATCCAGC GCATCCGCGT
TACATTCAGA CCGTTTGGGG CCTGGGCTAC GTCTTTGTAC CGGACGGCTC TAAAGCATGA
|
|---|
| Protein sequence | MQENYKILVV DDDMRLRALL ERYLTEQGFQ VRSVANAEQM DRLLTRESFH LMVLDLMLPG
EDGLSICRRL RSQSNPMPII MVTAKGEEVD RIVGLEIGAD DYIPKPFNPR ELLARIRAVL
RRQANELPGA PSQEEAVIAF GKFKLNLGTR EMFREDEPMP LTSGEFAVLK ALVSHPREPL
SRDKLMNLAR GREYSAMERS IDVQISRLRR MVEEDPAHPR YIQTVWGLGY VFVPDGSKA
|
|---|
| |