| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3782 |
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| Symbol | pckA |
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| ID | 6270001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3507152 |
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| End bp | 3508774 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641727645 |
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| Product | phosphoenolpyruvate carboxykinase |
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| Protein accession | YP_001882080 |
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| Protein GI | 187733615 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1866] Phosphoenolpyruvate carboxykinase (ATP) |
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| TIGRFAM ID | [TIGR00224] phosphoenolpyruvate carboxykinase (ATP) |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTTA ACAATGGTTT GACCCCGCAA GAACTCGAGG CTTATGGTAT CAGTGACGTA
CATGATATCG TTTACAACCC AAGCTACGAC CTGCTGTATC AGGAAGAGCT CGATCCGAGC
CTGACAGGTT ATGAGCGCGG GGTGTTAACT AATCTGGGTG CCGTTGCCGT CGATACCGGG
ATCTTCACCG GTCGTTCACC AAAAGATAAG TATATCGTCC GTGACGATAC CACTCGCGAT
ACTTTCTGGT GGGCAGACAA AGGCAAAGGT AAGAACGACA ACAAACCTCT CTCTCCGGAA
ACCTGGCAGC ATCTGAAAGG CCTGGTGACC AGGCAGCTTT CCGGCAAACG TCTGTTCGTT
GTCGACGCTT TCTGTGGTGC GAACCCGGAT ACTCGTCTTT CCGTCCGTTT CATCACCGAA
GTGGCCTGGC AGGCGCATTT TGTCAAAAAC ATGTTTATTC GCCCGAGCGA TGAAGAGCTG
GCAGGTTTCA AACCAGACTT TATCGTTATG AACGGCGCGA AGTGCACTAA CCCGCAGTGG
AAAGAACAGG GTCTGAACTC CGAAAACTTC GTGGCGTTTA ACCTGACCGA GCGCATGCAG
CTGATTGGCG GCACCTGGTA CGGCGGCGAA ATGAAGAAAG GGATGTTCTC GATGATGAAC
TACCTGCTGC CGCTGAAAGG TATCGCTTCT ATGCACTGCT CCGCCAACGT TGGCGAGAAA
GGCGATGTTG CGGTGTTCTT CGGCCTTTCC GGCACCGGTA AAACCACCCT TTCCACCGAC
CCGAAACGCC GCCTGATTGG CGATGACGAA CACGGCTGGG ACGATGACGG CGTGTTTAAT
TTCGAAGGCG GCTGCTACGC AAAAACTATC AAACTGTCGA AAGAAGCGGA ACCTGAAATC
TACAACGCTA TCCGTCGTGA TGCGCTGCTG GAAAACGTCA CCGTGCGTGA AGATGGCACT
ATCGACTTTG ATGATGGTTC AAAAACCGAG AACACCCGCG TTTCTTATCC AATCTATCAC
ATCGATAACA TCGTTAAGCC GGTTTCCAAA GCGGGCCACG CGACTAAGGT TATCTTCCTG
ACTGCTGATG CTTTCGGCGT GTTGCCGCCG GTTTCTCGCC TGACTGCCGA TCAAACCCAG
TATCACTTCC TCTCTGGCTT CACCGCCAAA CTGGCCGGTA CTGAGCGTGG CATCACCGAA
CCGACGCCAA CCTTCTCCGC TTGCTTCGGC GCGGCATTCC TGTCGCTGCA CCCGACTCAG
TACGCAGAAG TGCTGGTGAA ACGTATGCAG GCGGCGGGCG CGCAGGCTTA TCTGGTTAAC
ACTGGCTGGA ACGGCACAGG CAAACGTATC TCGATTAAAG ATACCCGCGC CATTATCGAC
GCCATCCTCA ACGGTTCGCT GGATAATGCA GAAACCTTCA CTCTGCCGAT GTTTAACCTG
GCGATCCCAA CCGAACTGCC GGGCGTAGAC ACGAAGATTC TCGATCCGCG TAACACCTAC
GCTTCTCCGG AACAGTGGCA GGAAAAAGCC GAAACCCTGG CGAAACTGTT TATCGACAAC
TTCGATAAAT ACACCGACAC CCCTGCGGGT GCCGCGCTGG TAGCGGCTGG TCCGAAACTG
TAA
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| Protein sequence | MRVNNGLTPQ ELEAYGISDV HDIVYNPSYD LLYQEELDPS LTGYERGVLT NLGAVAVDTG
IFTGRSPKDK YIVRDDTTRD TFWWADKGKG KNDNKPLSPE TWQHLKGLVT RQLSGKRLFV
VDAFCGANPD TRLSVRFITE VAWQAHFVKN MFIRPSDEEL AGFKPDFIVM NGAKCTNPQW
KEQGLNSENF VAFNLTERMQ LIGGTWYGGE MKKGMFSMMN YLLPLKGIAS MHCSANVGEK
GDVAVFFGLS GTGKTTLSTD PKRRLIGDDE HGWDDDGVFN FEGGCYAKTI KLSKEAEPEI
YNAIRRDALL ENVTVREDGT IDFDDGSKTE NTRVSYPIYH IDNIVKPVSK AGHATKVIFL
TADAFGVLPP VSRLTADQTQ YHFLSGFTAK LAGTERGITE PTPTFSACFG AAFLSLHPTQ
YAEVLVKRMQ AAGAQAYLVN TGWNGTGKRI SIKDTRAIID AILNGSLDNA ETFTLPMFNL
AIPTELPGVD TKILDPRNTY ASPEQWQEKA ETLAKLFIDN FDKYTDTPAG AALVAAGPKL
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