Gene SbBS512_E3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3779 
SymbolhslO 
ID6271261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3504031 
End bp3504915 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content52% 
IMG OID641727642 
ProductHsp33-like chaperonin 
Protein accessionYP_001882077 
Protein GI187731849 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATGC CGCAACATGA CCAATTACAT CGCTATCTGT TTGAAAATTT TGCCGTTCGC 
GGCGAACTGG TAACCGTTTC GGAAACCCTG CAACAGATCC TTGAGAACCA CGATTATCCG
CAGCCCGTTA AAAACGTGCT GGCAGAACTG CTGGTTGCGA CCAGCCTGTT AACCGCTACG
CTGAAGTTTG ATGGTGATAT CACCGTACAG CTGCAGGGCG ACGGTCCGAT GAATCTGGCG
GTTATTAACG GTAACAATAA CCAGCAAATG CGCGGTGTGG CGCGCGTGCA GGGCGAAATT
CCAGAAAATG CCGACCTGAA AACGCTGGTC GGCAATGGTT ACGTGGTGAT CACCATTACC
CCGAGCGAAG GCGAACGCTA TCAGGGCGTA GTTGGTCTGG AAGGTGATAC CCTGGCGGCC
TGCCTGGAAG ATTACTTTAT GCGTTCTGAA CAGCTGCCGA CGCGCCTGTT TATTCGCACC
GGCGACGTAG ACGGCAAACC GGCTACAGGC GGTATGTTGT TGCAGGTAAT GCCTGCGCAA
AATGCCCAGC AGGACGACTT TGACCACCTG GCGACGCTAA CCGAAACCAT CAAAACCGAA
GAACTGCTGA CCTTACCGGC AAACGAAGTG TTGTGGCGTT TGTATCACGA AGAAGAGGTG
ACGGTTTACG ATCCGCAGGA TGTGGAGTTC AAATGCACCT GCTCGCGTGA ACATTGCGCC
GATGCGCTGA AAACGCTGCC TGATGAAGAA GTTGATAGCA TCCTGGCGGA AGATGGCGAA
ATTGACATGC ATTGTGATTA CTGCGGTAAC CACTATCTGT TCAATGCGAT GGATATTGCT
GAAATCCGCA ACAACGCGTC TCCGGCAGAT CCGCAAGTTC ATTAA
 
Protein sequence
MIMPQHDQLH RYLFENFAVR GELVTVSETL QQILENHDYP QPVKNVLAEL LVATSLLTAT 
LKFDGDITVQ LQGDGPMNLA VINGNNNQQM RGVARVQGEI PENADLKTLV GNGYVVITIT
PSEGERYQGV VGLEGDTLAA CLEDYFMRSE QLPTRLFIRT GDVDGKPATG GMLLQVMPAQ
NAQQDDFDHL ATLTETIKTE ELLTLPANEV LWRLYHEEEV TVYDPQDVEF KCTCSREHCA
DALKTLPDEE VDSILAEDGE IDMHCDYCGN HYLFNAMDIA EIRNNASPAD PQVH