Gene SbBS512_E3773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3773 
SymbolmrcA 
ID6271793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3497130 
End bp3499682 
Gene Length2553 bp 
Protein Length850 aa 
Translation table11 
GC content55% 
IMG OID641727636 
Productpeptidoglycan synthetase 
Protein accessionYP_001882071 
Protein GI187734233 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGTTCG TAAAGTATTT TTTGATCCTT GCAGTCTGTT GCATTCTGCT GGGAGCAGGC 
TCGATTTATG GCCTATACCG CTACATCGAG CCACAACTGC CGGATGTGGC GACATTAAAA
GATGTTCGCC TGCAAATTCC GATGCAGATT TACAGCGCCG ATGGCGAGCT GATTGCTCAA
TACGGTGAGA AACGTCGTAT TCCGGTTACG TTGGATCAAA TCCCGCCGGA GATGGTGAAA
GCCTTTATCG CGACGGAAGA CAGTCGCTTC TACGAGCATC ACGGCGTTGA CCCGGTGGGG
ATCTTCCGTG CGGCAAGTGT GGCGCTGTTC TCCGGCCACG CGTCACAAGG GGCGAGTACC
ATTACCCAGC AGCTGGCGAG AAACTTCTTC CTCAGTCCAG AACGCACGCT GATGCGTAAG
ATTAAGGAAG TCTTCCTCGC GATTCGCATT GAACAGTTGC TGACGAAAGA CGAGATCCTC
GAGCTTTATC TGAACAAGAT TTACCTCGGT TACCGCGCCT ATGGTGTCGG TGCTGCGGCA
CAAGTCTATT TCGGTAAAAC GGTCGACCAA CTGACGCTGA ACGAAATGGC TGTGATAGCC
GGGCTGCCGA AAGCGCCTTC CACCTTTAAT CCGCTCTACT CAATGGATCG TGCCGTCGCG
CGGCGTAACG TCGTACTGTC GCGGATGCTG GATGAAGGGT ATATCACCCA ACAACAGTTC
GATCAGACAC GCACTGAGGC GATTAACGCT AACTATCACG CGCCGGAGAT TGCTTTCTCT
GCGCCGTACC TGAGCGAAAT GGTGCGCCAG GAGATGTATA ACCGTTATGG CGAAAGTGCC
TATGAAGACG GTTATCGCAT TTACACCACC ATCACCCGCA AAGTGCAGCA GGCCGCACAG
CAGGCGGTAC GTAATAACGT GCTGGACTAC GACATGCGCC ACGGCTATCG CGGCCCGGCA
AATGTGCTGT GGAAAGTGGG CGAGTCGGCG TGGGATAACA ACAAGATTAC CGATACGCTG
AAGGCGCTGC CGACCTATGG TCCGCTGCTG CCTGCCGCAG TCACCAGCGC CAATCCTCAG
GGAGCGACGG CGATGCTGGC GGACGGGTCG ACCGTCGCAT TGAGTATGGA AGGCGTTCGC
TGGGCGCGTC CTTACCGTTC GGATACTCAG CAAGGACCGA CGCCGCGTAA AGTGACCGAT
GTTCTGCAAA CGGGTCAGCA AATCTGGGTT CGTCAGGTTG GCGATGCATG GTGGCTGGCA
CAAGTGCCGG AAGTGAACTC GGCGCTGGTG TCGATCAATC CGCAAAACGG TGCCGTTATG
GCGCTGGTCG GTGGCTTTGA TTTCAATCAG AGCAAGTTTA ACCGCGCCAC CCAGGCACTG
CGTCAGGTGG GTTCCAACAT CAAACCGTTC CTCTACACCG CGGCGATGGA TAAAGGTCTG
ACGCTGGCAA GTATGTTGAA CGATGTGCCA ATTTCTCGCT GGGACGCAGG TGCCGGTTCT
GACTGGCAGC CGAAAAACTC GCCGCCACAA TATGCTGGTC CAATTCGCTT ACGTCAGGGG
CTGGGTCAGT CGAAAAACGT GGTGATGGTA CGTGCAATGC GGGCTATGGG CGTCGACTAC
GCTGCAGAAT ATCTGCAACG CTTCGGCTTC CCGGCGCAAA ACATTGTCCA CACCGAATCG
CTGGCGCTGG GTTCAGCGTC CTTCACCCCA ATGCAGGTGG CGCGCGGCTA CGCGGTCATG
GCGAACGGCG GCTTCCTGGT GGACCCGTGG TTTATCAGCA AAATTGAAAA CGATCAGGGC
GGCGTGATTT TCGAAGCGAA ACCGAAAGTA GCCTGCCCGG AATGCGATAT TCCGGTGATT
TACGGTGATA CGCAGAAATC GAACGTGCTG GAAAATAACG ATGTTGAAGA TGTCGCTATC
TCCCGCGAGC AGCAGAATGT TTCTGTACCA ATGCCGCAGC TGGAGCAGGC AAATCAGGCG
TTAGTGGCGA AGACTGGCGC GCAGGAGTAC GCACCGCACG TCATCAACAC TCCGCTGGCA
TTCCTGATTA AGAGTGCTTT GAACACCAAT ATCTTTGGTG AGCCAGGCTG GCAGGGTACT
GGCTGGCGTG CAGGTCGTGA TTTGCAGCGT CGCGATATCG GCGGGAAAAC CGGTACCACT
AACAGTTCGA AAGATGCGTG GTTCTCGGGT TACGGTCCGG GCGTTGTGAC CTCGGTCTGG
ATTGGCTTTG ATGATCACCG TCGTAATCTC GGTCATACAA CGGCTTCCGG AGCGATTAAA
GATCAGATCT CAGGTTACGA AGGCGGAGCC AAGAGTGCCC AGCCTGCATG GGACGCTTAT
ATGAAAGCCG TTCTTGAAGG TGTGCCGGAG CAGCCGCTGA CGCCGCCACC GGGTATTGTG
ACGGTGAATA TCGATCGCAG CACCGGGCAG TTAGCTAATG GTGGCAACAG CCGCGAAGAG
TATTTCATCG AAGGTACGCA GCCGACACAA CAGGCGGTGC ACGAGGTGGG AACGACCATT
ATCGATAATG GTGAGGCACA GGAATTGTTC TGA
 
Protein sequence
MKFVKYFLIL AVCCILLGAG SIYGLYRYIE PQLPDVATLK DVRLQIPMQI YSADGELIAQ 
YGEKRRIPVT LDQIPPEMVK AFIATEDSRF YEHHGVDPVG IFRAASVALF SGHASQGAST
ITQQLARNFF LSPERTLMRK IKEVFLAIRI EQLLTKDEIL ELYLNKIYLG YRAYGVGAAA
QVYFGKTVDQ LTLNEMAVIA GLPKAPSTFN PLYSMDRAVA RRNVVLSRML DEGYITQQQF
DQTRTEAINA NYHAPEIAFS APYLSEMVRQ EMYNRYGESA YEDGYRIYTT ITRKVQQAAQ
QAVRNNVLDY DMRHGYRGPA NVLWKVGESA WDNNKITDTL KALPTYGPLL PAAVTSANPQ
GATAMLADGS TVALSMEGVR WARPYRSDTQ QGPTPRKVTD VLQTGQQIWV RQVGDAWWLA
QVPEVNSALV SINPQNGAVM ALVGGFDFNQ SKFNRATQAL RQVGSNIKPF LYTAAMDKGL
TLASMLNDVP ISRWDAGAGS DWQPKNSPPQ YAGPIRLRQG LGQSKNVVMV RAMRAMGVDY
AAEYLQRFGF PAQNIVHTES LALGSASFTP MQVARGYAVM ANGGFLVDPW FISKIENDQG
GVIFEAKPKV ACPECDIPVI YGDTQKSNVL ENNDVEDVAI SREQQNVSVP MPQLEQANQA
LVAKTGAQEY APHVINTPLA FLIKSALNTN IFGEPGWQGT GWRAGRDLQR RDIGGKTGTT
NSSKDAWFSG YGPGVVTSVW IGFDDHRRNL GHTTASGAIK DQISGYEGGA KSAQPAWDAY
MKAVLEGVPE QPLTPPPGIV TVNIDRSTGQ LANGGNSREE YFIEGTQPTQ QAVHEVGTTI
IDNGEAQELF