Gene SbBS512_E3772 details

Gene Information

• Locus tag: SbBS512_E3772
• Symbol: hofM
• ID: 6268525
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 3496231
• End bp: 3497010
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641727635
• Product: HofM protein
• Protein accession: YP_001882070
• Protein GI: 187731732

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.135711
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTTA AGATCTGGCA AATTGGTTTG CATTTACAAC AGCAAGAAGC GGTAGCGGTT 
GCGATCGTGC GGGGCGCAAA AGAATGCTTT TTGCAACGCT GGTGGCGGTT GCCGCTGGAG 
AACGACATTA TCAAAGATGG GCGGATTGTT GATGCGCAGC AGCTGGCTAA AACGTTGTTA 
CCTTGGAGTC GCGAACTGCC GCAGCGTCAT CACATTATGT TGGCGTTTCC CGCCAGTCGC 
ACATTACAGC GGTCATTTCC GCGCCCGTCG ATGTCCCTTG GTGAGCGGGA GCAAACGGCC 
TGGCTGTCAG GGACGATGGC CCGCGAGCTG GATATGGATC CGGACTCCCT GCGCTTCGAT 
TACAGCGAAG ACTCACTCAG TCCCGCCTAT AACGTGACTG CCGCGCAAAG CAAAGAGCTG 
GCAACGCTGC TTACTCTGGC AGAAAGGTTG CGTGTTCATG TTAGTGCGAT CACCCCGGAT 
GCCAGTGCAT TACAGCGATT CCTGCCTTTT TTACCTTCTC ATCAGCAATG TCTGGCCTGG 
CGTGATAACG AACAGTGGCT GTGGGCGACG CGCTATAGCT GGGGGCGCAA ACTGGCGGTG 
GGGATGACTA GCGCGAAGGA GCTGGCGGCA GCGTTATTCG TTGATCCCGA CAGCGTCGCG 
ATATGTGGCG AAGGCGGATT TGACCCCTGG GAGGCCGTTT CTGTTCGTCA GCCGCTGCTA 
CCGCCGCCTG GTGGAGACTT TGCCATCGCG CTGGGGCTGG CGCTTGGGAA GGCGTACTGA 

 

Protein sequence

MAFKIWQIGL HLQQQEAVAV AIVRGAKECF LQRWWRLPLE NDIIKDGRIV DAQQLAKTLL 
PWSRELPQRH HIMLAFPASR TLQRSFPRPS MSLGEREQTA WLSGTMAREL DMDPDSLRFD 
YSEDSLSPAY NVTAAQSKEL ATLLTLAERL RVHVSAITPD ASALQRFLPF LPSHQQCLAW 
RDNEQWLWAT RYSWGRKLAV GMTSAKELAA ALFVDPDSVA ICGEGGFDPW EAVSVRQPLL 
PPPGGDFAIA LGLALGKAY