Gene SbBS512_E3761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3761 
SymboltrpS 
ID6271327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp3486893 
End bp3487897 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content52% 
IMG OID641727624 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001882059 
Protein GI187734261 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.602445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAGC CCATCGTTTT TAGTGGCGCA CAGCCCTCAG GTGAATTGAC CATTGGTAAC 
TACATGGGTG CGCTGCGTCA GTGGGTAAAC ATGCAGGATG ACTACCATTG CATTTACTGT 
ATCGTTGACC AACACGCGAT CACCGTGCGC CAGGATGCAC AGAAGCTGCG TAAAGCGACG 
CTGGATACGC TGGCCTTGTA TCTGGCTTGT GGTATCGATC CTGAGAAAAG CACCATTTTT 
GTTCAGTCCC ACGTACCAGA ACATGCGCAG TTAGGCTGGG CACTGAACTG CTATACCTAC 
TTCGGCGAAC TGAGCCGCAT GACCCAGTTT AAAGATAAAT CTGCGCGTTA TGCCGAGAAC 
ATCAACGCTG GTCTGTTTGA CTATCCGGTG CTGATGGCTG CGGACATCCT GCTGTATCAA 
ACTAATCTGG TACCGGTGGG TGAAGACCAG AAACAGCACC TGGAACTGAG TCGCGATATC 
GCCCAGCGTT TCAACGCGCT GTATGGCGAG ATCTTTAAGG TGCCGGAGCC GTTTATTCCG 
AAATCTGGCG CGCGCGTAAT GTCGCTGCTG GAGCCGACCA AGAAGATGTC CAAGTCTGAC 
GATAACCGCA ATAACGTTAT CGGCCTGCTG GAAGATCCGA AATCGGTAGT GAAGAAAATC 
AAACGCGCGG TCACTGACTC CGACGAGCCG CCGGTAGTTC ACTACGATGT GCAGAACAAA 
GCGGGCGTTT CCAACCTGCT GGATATCCTT TCTGCGGTAA CGGGCCAGAG CATCCCAGAA 
CTGGAAAAAC AGTTCGAAGG CAAGATGTAT GGTCATCTGA AAGGTGAAGT GGCTGATGCC 
GTTTCCGGTA TGCTGACTGA ATTGCAGGAA CGCTATCACC GTTTCCGCAA CGATGAAGCC 
TTCCTGCAAC AGGTGATGAA AGACGGCGCA GAAAAAGCCA GTGTACACGC TTCCCGTACG 
CTGAAAGCGG TGTACGAAGC GATTGGTTTT GTGGCGAAGC CGTAA
 
Protein sequence
MTKPIVFSGA QPSGELTIGN YMGALRQWVN MQDDYHCIYC IVDQHAITVR QDAQKLRKAT 
LDTLALYLAC GIDPEKSTIF VQSHVPEHAQ LGWALNCYTY FGELSRMTQF KDKSARYAEN 
INAGLFDYPV LMAADILLYQ TNLVPVGEDQ KQHLELSRDI AQRFNALYGE IFKVPEPFIP 
KSGARVMSLL EPTKKMSKSD DNRNNVIGLL EDPKSVVKKI KRAVTDSDEP PVVHYDVQNK 
AGVSNLLDIL SAVTGQSIPE LEKQFEGKMY GHLKGEVADA VSGMLTELQE RYHRFRNDEA 
FLQQVMKDGA EKASVHASRT LKAVYEAIGF VAKP