Gene SbBS512_E3734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3734 
Symbol 
ID6269884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3458918 
End bp3461008 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content53% 
IMG OID641727598 
Productintegral membrane protein, YccS/YhfK family 
Protein accessionYP_001882033 
Protein GI187733272 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01667] integral membrane protein, YccS/YhfK family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCGCA GACTGATTTA TCACCCCGAT ATCAACTATG CACTTCGACA AACGCTGGTG 
CTATGTTTGC CCGTGGCCGT TGGGTTAATG CTTGGCGAAT TACGATTCGG TCTGCTCTTC
TCTCTCGTTC CTGCCTGTTG CAATATTGCG GGCCTTGATA CGCCTCATAA ACGTTTTTTC
AAACGCTTAA TCATTGGTGC GTCGCTGTTT GCCACCTGTA GCTTACTGAC ACAGCTGCTA
CTGGCAAAAG ATGTTCCCCT GCCCTTTTTG CTGACCGGAT TAACGCTGGT ACTTGGCGTC
ACTGCTGAGT TGGGGCCATT GCACGCAAAA TTGCTTCCCG CATCGCTGCT GGCAGCCATT
TTTACCCTCA GTCTGGCGGG ATACATGCCG GTCTGGGAAC CGTTGCTCAT CTATGCGTTG
GGCACTCTCT GGTACGGATT GTTTAACTGG TTTTGGTTCT GGATCTGGCG CGAACAACCG
CTGCGCGAGT CACTAAGTCT GCTGTACCGT GAACTGGCAG ATTATTGTGA AGCCAAATAC
AGCCTGCTTA CCCAGCACAC CGACCCTGAA AAAGCGCTGC CGCCGCTGCT GGTGCGCCAG
CAAAAAGCGG TCGATCTAAT TACCCAGTGC TATCAGCAAA TGCATATGCT TTCCGCGCAA
AATAATACTG ACTACAAGCG GATGCTGCGT ATTTTCCAGG AGGCGCTGGA TTTACAGGAA
CATATTTCGG TCAGTTTGCA TCAGCCGGAA GAGGTGCAAA AGCTGGTCGA GCGTAGCCAT
GCGGAAGAAG TTATCCGCTG GAATGCGCAA ACCGTCGCCG CTCGCCTGCG CGTGCTGGCT
GATGACATTC TTTACCATCG CCTGCCAACG CGTTTTACGA TGGAAAAGCA AATTGGCGCA
CTGGAAAAAA TCGCCCGCCA GCATCCGGAT AATCCGGTTG GGCAATTCTG CTACTGGCAT
TTCAGCCGCA TCGCCCGCGT GCTGCGCACC CAAAAACCGC TCTATGCCCG TGACTTACTG
GCCGATAAAC AGCGGCGAAT GCCATTACTT CCGGCGCTGA AAAGTTATCT GTCACTAAAG
TCTCCGGCGC TACGCAATGC CGGACGACTC AGTGTGATGT TAAGCGTTGC CAGCCTGATG
GGCACCGCGC TGCATCTGCC GAAGTCGTAC TGGATCCTGA TGACGGTATT GCTGGTGACA
CAAAATGGCT ATGGCGCAAC CCGTCTGAGG ATTGTGAATC GCTCCGTGGG AACCGTGGTC
GGGTTAATCA TTGCGGGCGT GGCGCTGCAC TTTAAAATTC CCGAAGGTTA CACCCTGACG
TTGATGCTGA TTACCACCCT CGCCAGCTAC CTGATATTGC GCAAAAACTA CGGCTGGGCG
ACGGTCGGTT TTACTATTAC CGCAGTGTAT ACCCTGCAAC TATTGTGGTT GAACGGCGAG
CAATACATCC TTCCGCGTCT TATCGATACC ATTATTGGTT GTTTAATTGC TTTCGGCGGT
ACTGTCTGGC TGTGGCCGCA GTGGCAGAGC GGGTTATTGC GTAAAAACGC CCATGACGCT
TTAGAAGCCT ATCAGGAAGC GATTCGCTTG ATTCTTAGCG AGGATCCGCA ACCTACGCCA
CTGGCCTGGC AGCGAATGCG GGTAAATCAG GCACATAACA CTCTGTATAA CTCATTGAAT
CAGGCGATGC AGGAACCGGC GTTTAACAGC CATTATCTGG CAGATATGAA ACTGTGGGTA
ACGCACAGCC AGTTTATTGT TGAGCATATT AATGCCATGA CCACGCTGGC GCGGGAACAC
CGGGCATTGC CACCTGAACT GGCACAAGAG TATTTACAGT CTTGTGAAAT CGCCATTCAG
CGTTGTCAGC AGCGACTGGA GTATGACGAA CCGGGTAGTT CTGGCGATGC CAATATCATG
GATGCGCCGG AGATGCAGCC GCACGAAGGC GCGGCAGGTA CGCTGGAGCA GCATTTACAG
CGGGTTATTG GTCATCTGAA CACCATGCAC ACCATTTCGT CGATGGCATG GCGTCAGCGA
CCGCATCACG GGATTTGGCT GAGTCGCAAG TTGCGGGATT CGAAGGCGTA A
 
Protein sequence
MWRRLIYHPD INYALRQTLV LCLPVAVGLM LGELRFGLLF SLVPACCNIA GLDTPHKRFF 
KRLIIGASLF ATCSLLTQLL LAKDVPLPFL LTGLTLVLGV TAELGPLHAK LLPASLLAAI
FTLSLAGYMP VWEPLLIYAL GTLWYGLFNW FWFWIWREQP LRESLSLLYR ELADYCEAKY
SLLTQHTDPE KALPPLLVRQ QKAVDLITQC YQQMHMLSAQ NNTDYKRMLR IFQEALDLQE
HISVSLHQPE EVQKLVERSH AEEVIRWNAQ TVAARLRVLA DDILYHRLPT RFTMEKQIGA
LEKIARQHPD NPVGQFCYWH FSRIARVLRT QKPLYARDLL ADKQRRMPLL PALKSYLSLK
SPALRNAGRL SVMLSVASLM GTALHLPKSY WILMTVLLVT QNGYGATRLR IVNRSVGTVV
GLIIAGVALH FKIPEGYTLT LMLITTLASY LILRKNYGWA TVGFTITAVY TLQLLWLNGE
QYILPRLIDT IIGCLIAFGG TVWLWPQWQS GLLRKNAHDA LEAYQEAIRL ILSEDPQPTP
LAWQRMRVNQ AHNTLYNSLN QAMQEPAFNS HYLADMKLWV THSQFIVEHI NAMTTLAREH
RALPPELAQE YLQSCEIAIQ RCQQRLEYDE PGSSGDANIM DAPEMQPHEG AAGTLEQHLQ
RVIGHLNTMH TISSMAWRQR PHHGIWLSRK LRDSKA