Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3716 |
Symbol | rpsL |
ID | 6271546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3444962 |
End bp | 3445336 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641727580 |
Product | 30S ribosomal protein S12 |
Protein accession | YP_001882015 |
Protein GI | 187733627 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000000501374 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAG TTAACCAGCT GGTACGCAAA CCACGTGCTC GCAAAGTTGC GAAAAGCAAC GTGCCTGCGC TGGAAGCATG CCCGCAAAAA CGTGGCGTAT GTACTCGTGT ATATACTACC ACTCCTAAAA AACCGAACTC CGCGCTGCGT AAAGTATGCC GTGTTCGTCT GACTAACGGT TTCGAAGTGA CTTCCTACAT CGGTGGTGAA GGTCACAACC TGCAGGAGCA CTCCGTGATC CTGATCCGTG GCGGTCGTGT TAAAGACCTC CCGGGTGTTC GTTACCACAC CGTACGTGGT GCGCTTGACT GCTCCGGCGT TAAAGACCGT AAGCAGGCTC GTTCCAAGTA TGGCGTGAAG CGTCCTAAGG CTTAA
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Protein sequence | MATVNQLVRK PRARKVAKSN VPALEACPQK RGVCTRVYTT TPKKPNSALR KVCRVRLTNG FEVTSYIGGE GHNLQEHSVI LIRGGRVKDL PGVRYHTVRG ALDCSGVKDR KQARSKYGVK RPKA
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