Gene SbBS512_E3686 details

Gene Information

• Locus tag: SbBS512_E3686
• Symbol: rplO
• ID: 6271342
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 3426108
• End bp: 3426542
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641727550
• Product: 50S ribosomal protein L15
• Protein accession: YP_001881985
• Protein GI: 187731767
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000000000602287
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTTAA ATACTCTGTC TCCGGCCGAA GGCTCCAAAA AGGCGGGTAA ACGCTTGGGT 
CGTGGTATCG GTTCTGGCCT CGGTAAAACC GGTGGTCGTG GTCACAAAGG TCAGAAGTCT 
CGTTCTGGCG GTGGCGTACG TCGCGGTTTC GAGGGTGGTC AGATGCCTCT GTACCGTCGT 
CTGCCGAAAT TCGGCTTCAC TTCTCGTAAA GCAGCGATTA CAGCCGAAGT TCGTCTGTCT 
GACCTGGCTA AAGTAGAAGG CGGTGTTGTA GACCTGAACA CGCTGAAAGC GGCTAACATT 
ATCGGTATCC AGATCGAGTT CGCGAAAGTG ATCCTGGCTG GCGAAGTAAC GACTCCGGTA 
ACTGTTCGTG GCCTGCGTGT TACTAAAGGC GCTCGTGCTG CTATCGAAGC TGCTGGCGGT 
AAAATCGAGG AATAA 

 

Protein sequence

MRLNTLSPAE GSKKAGKRLG RGIGSGLGKT GGRGHKGQKS RSGGGVRRGF EGGQMPLYRR 
LPKFGFTSRK AAITAEVRLS DLAKVEGGVV DLNTLKAANI IGIQIEFAKV ILAGEVTTPV 
TVRGLRVTKG ARAAIEAAGG KIEE