| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3683 |
|---|
| Symbol | rpsK |
|---|
| ID | 6272825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 3423712 |
|---|
| End bp | 3424101 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641727547 |
|---|
| Product | 30S ribosomal protein S11 |
|---|
| Protein accession | YP_001881982 |
|---|
| Protein GI | 187730089 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0100] Ribosomal protein S11 |
|---|
| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.000095493 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG CACCAATTCG TGCACGTAAA CGTGTAAGAA AACAAGTCTC TGACGGCGTG
GCTCATATCC ATGCTTCTTT CAACAACACC ATCGTGACTA TCACTGATCG TCAGGGTAAC
GCGTTGGGTT GGGCAACAGC CGGTGGTTCC GGTTTCCGTG GTTCTCGCAA ATCCACTCCG
TTTGCAGCTC AGGTTGCAGC AGAGCGTTGC GCTGACGCCG TGAAAGAATA CGGCATCAAG
AATCTGGAAG TTATGGTTAA AGGTCCGGGT CCAGGCCGCG AATCTACTAT TCGTGCTCTG
AACGCCGCAG GTTTCCGCAT CACTAACATT ACTGATGTGA CTCCGATCCC TCATAACGGT
TGTCGTCCGC CGAAAAAACG TCGCGTATAA
|
|---|
| Protein sequence | MAKAPIRARK RVRKQVSDGV AHIHASFNNT IVTITDRQGN ALGWATAGGS GFRGSRKSTP
FAAQVAAERC ADAVKEYGIK NLEVMVKGPG PGRESTIRAL NAAGFRITNI TDVTPIPHNG
CRPPKKRRV
|
|---|
| |