Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3673 |
Symbol | rsmB |
ID | 6270668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3414760 |
End bp | 3416049 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641727537 |
Product | 16S rRNA methyltransferase B |
Protein accession | YP_001881972 |
Protein GI | 187732355 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC AACGTAATTT ACGTAGCATG GCGGCCCAGG CCGTTGAACA AGTCGTCGAG CAAGGGCAAT CATTAAGCAA CATTCTGCCA CCGCTCCAGC AAAAAGTTTC TGATAAAGAC AAAGCACTTC TTCAAGAGTT GTGCTTTGGC GTACTGCGTA CGCTTTCGCA GTTAGACTGG CTGATTAATA AGTTAATGGC CCGTCCGATG ACCGGCAAAC AGCGCACTGT GCATTACCTG ATTATGGTTG GTTTGTATCA ACTGCTTTAT ACCCGCATTC CACCTCATGC TGCGCTGGCT GAAACGGTTG AAGGCGCTAT CGCAATTAAG CGTCCGCAAC TTAAAGGGTT GATTAACGGT GTATTACGCC AGTTCCAGCG TCAGCAAGAA GAGTTATTAG CCAAGTTTAA TGCCAGTGAT GCACGTTATC TGCATCCTTC CTGGTTGCTG AAGCGTCTGC AAAAAGCGTA TCCAGAGCAG TGGCAATCCA TCGTCGAAGC CAATAACCAG CGTCCGCCAA TGTGGCTGCG CGTTAATCGT ACGCATCATT CCCGCGACAG CTGGCTTGCA TTGCTGGATG AAGCAGGAAT GAAAGGTTTC CCGCATGCGG ATTACCCTGA TGCTGTACGT CTGGAAACAC CTGCACCTGT TCATGCGCTA CCTGGTTTTG AAGACGGATG GGTTACCGTT CAGGATGCAT CAGCACAAGG TTGCATGACC TGGCTTGCGC CACAAAACAG TGAACACATT CTGGATCTTT GTGCCGCCCC CGGCGGTAAA ACAACGCATA TCCTTGAGGT GGCACCAGAA GCGCAGGTTG TTGCGGTTGA TATTGACGAA CAGCGCCTCT CTCGCGTTTA CGACAATTTA AAACGCCTTG GTATGAAGGC AACCGTGAAA CAAGGTGATG GCCGTTACCC TTCCCAATGG TGTGGCGAGC AACAGTTTGA TCGCATTTTA TTAGATGCGC CTTGTTCAGC AACGGGGGTG ATTCGTCACC ATCCGGATAT TAAATGGTTA CGTCGCGATC GCGATATCCC GGAACTCGCG CAATTGCAGT CTGAAATTCT CGACGCCATT TGGCCGCATT TAAAATCCGG TGGAACCCTG GTCTATGCCA CCTGTTCGGT GTTACCGGAA GAGAATAGCC TGCAGATTAA AGCTTTTTTG CAACGTACCG CTGATGCCGA ACTTTGCGAA ACAGGAGCAC CAGAGCAACC GGGTAAACAA AATCTGCCTG GTGCCGAAGA GGGCGACGGC TTCTTTTACG CTAAGCTAAT CAAAAAGTGA
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Protein sequence | MKKQRNLRSM AAQAVEQVVE QGQSLSNILP PLQQKVSDKD KALLQELCFG VLRTLSQLDW LINKLMARPM TGKQRTVHYL IMVGLYQLLY TRIPPHAALA ETVEGAIAIK RPQLKGLING VLRQFQRQQE ELLAKFNASD ARYLHPSWLL KRLQKAYPEQ WQSIVEANNQ RPPMWLRVNR THHSRDSWLA LLDEAGMKGF PHADYPDAVR LETPAPVHAL PGFEDGWVTV QDASAQGCMT WLAPQNSEHI LDLCAAPGGK TTHILEVAPE AQVVAVDIDE QRLSRVYDNL KRLGMKATVK QGDGRYPSQW CGEQQFDRIL LDAPCSATGV IRHHPDIKWL RRDRDIPELA QLQSEILDAI WPHLKSGGTL VYATCSVLPE ENSLQIKAFL QRTADAELCE TGAPEQPGKQ NLPGAEEGDG FFYAKLIKK
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