Gene SbBS512_E3672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3672 
Symbolfmt 
ID6272135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3413767 
End bp3414714 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content52% 
IMG OID641727536 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_001881971 
Protein GI187730742 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAGAAT CACTACGTAT TATTTTTGCG GGTACACCTG ACTTTGCAGC GCGTCATCTC 
GACGCGCTGT TGTCTTCTGG TCATAACGTC GTTGGCGTGT TCACCCAGCC AGACCGACCG
GCAGGACGCG GTAAAAAACT GATGCCCAGC CCGGTTAAAG TTCTGGCTGA GGAAAAAGGT
CTGCCCGTTT TTCAACCTGT TTCCCTGCGT CCACAAGAAA ACCAGCAACT GGTCGCCGAT
CTGCAGGCTG ATGTTATGGT CGTCGTCGCC TATGGCTTAA TTCTGCCTAA AGCAGTGCTG
GAGATGCCGC GTCTTGGCTG TATCAACGTT CATGGTTCAC TGCTGCCACG CTGGCGCGGT
GCTGCACCAA TCCAACGCTC ACTATGGGCG GGTGATGCAG AAACTGGTGT GACCATTATG
CAAATGGATG TCGGTTTAGA CACCGGTGAC ATGCTCTATA AGCTCTCCTG CCCGATTACT
GCAGAAGATA CCAGTGGTAC GCTGTACGAC AAGCTGGCAG AGCTTGGCCC ACAAGGGCTT
ATCACCACGT TGAAACAACT GGCAGACGGC ACGGCGAAAC CAGAAGTTCA GGACAAAACT
CTTGTCACTT ACGCCGAAAA GTTGAGTAAA GAAGAAGCGC GTATTGACTG GTCACTTTCG
GCAGCACAGC TTGAACGCTG CATTCGCGCT TTCAATCCAT GGCCAATGAG CTGGCTGGAA
ATTGAAAGAC AGCCGGTTAA AGTCTGGAAA GCGTCGGTCA TTGATACGGC AACCAACGCT
GCACCAGGAA CGATCCTTGA AGCCAACAAA CAAGGCATTC AGGTTGCAAC TGGTGATGGA
ATCCTGAATC TGCTCTCGTT ACAACCTGCG GGTAAGAAAG CGATGAGCGC GCAAGACCTC
CTGAATTCTC GTCGGGAATG GTTTGTTCCG GGCAACCGTC TGGCCTGA
 
Protein sequence
MSESLRIIFA GTPDFAARHL DALLSSGHNV VGVFTQPDRP AGRGKKLMPS PVKVLAEEKG 
LPVFQPVSLR PQENQQLVAD LQADVMVVVA YGLILPKAVL EMPRLGCINV HGSLLPRWRG
AAPIQRSLWA GDAETGVTIM QMDVGLDTGD MLYKLSCPIT AEDTSGTLYD KLAELGPQGL
ITTLKQLADG TAKPEVQDKT LVTYAEKLSK EEARIDWSLS AAQLERCIRA FNPWPMSWLE
IERQPVKVWK ASVIDTATNA APGTILEANK QGIQVATGDG ILNLLSLQPA GKKAMSAQDL
LNSRREWFVP GNRLA