| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3641 |
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| Symbol | panF |
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| ID | 6270878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3387168 |
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| End bp | 3388619 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641727508 |
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| Product | sodium/panthothenate symporter |
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| Protein accession | YP_001881950 |
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| Protein GI | 187730495 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4145] Na+/panthothenate symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02119] sodium/pantothenate symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000698464 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTTG AAGTGATTCT ACCGCTGGTC GCCTATCTGG TGGTGGTGTT CGGTATCTCT
GTTTATGCGA TGCGTAAACG GAGCACCGGT ACCTTCCTTA ATGAGTATTT CCTCGGCAGC
CGCTCTATGG GCGGTATTGT GCTGGCGATG ACGCTCACCG CGACCTATAT CAGTGCAAGT
TCGTTTATCG GCGGGCCTGG AGCTGCTTAT AAATACGGCC TGGGTTGGGT ATTGCTGGCG
ATGATTCAGC TTCCTGCAGT CTGGCTTTCG CTCGGTATTC TCGGCAAGAA GTTCGCGATT
CTTGCGCGCC GCTACAATGC AGTGACGCTG AACGACATGC TGTTTGCCCG CTACCAGAGT
CGTCTTCTGG TGTGGCTGGC GAGTTTGAGT TTGCTGGTTG CGTTCGTTGG GGCAATGACC
GTGCAGTTTA TCGGCGGTGC GCGCCTGCTG GAAACCGCGG CGGGTATTCC TTATGAAACC
GGGCTGCTGA TTTTCGGTAT CAGCATTGCG TTGTATACCG CCTTTGGCGG CTTTCGCGCC
AGCGTGCTGA ACGACACCAT GCAAGGGCTT GTGATGCTGA TTGGCACCGT TGTGCTGCTT
ATTGGCGTGG TACATGCCGC AGGTGGTTTA AGTAATGCGG TAGAGACGCT GCAAACCATC
GATCCGCAAC TGGTTACGCC ACAAGGCGCT GACGATATTC TGTCGCCTGC CTTTATGACG
TCGTTCTGGG TACTGGTGTG CTTTGGCGTG ATTGGCCTGC CGCATACTGC GGTGCGCTGT
ATCTCTTATA AAGACAGCAA AGCGGTACAC CGGGGGATCA TCATCGGTAC GATTGTAGTC
GCAATCCTGA TGTTCGGTAT GCACCTGGCC GGAGCGTTAG GTCGTGCAGT GATCCCCGAT
CTCACCGTAC CGGATCTGGT GATCCCGACG TTAATGGTAA AAGTGCTGCC ACCGTTTGCT
GCCGGGATCT TTCTGGCTGC ACCTATGGCT GCGATCATGT CGACAATTAA CGCCCAATTG
CTACAAAGTT CCGCTACGAT CATTAAAGAT CTCTATCTGA ATATCCGTCC GGATCAAATG
CAAAACGAGA CGCGTCTGAA GCGGATGTCG GCGGTAATTA CGTTAGTTCT CGGCGCGTTG
CTGCTGCTTG CCGCCTGGAA GCCGCCAGAA ATGATCATCT GGCTGAATTT GCTGGCCTTC
GGTGGGTTGG AAGCCGTTTT CCTGTGGCCG CTGGTGCTGG GTCTTTACTG GGAACGCGCC
AACGCCAAAG GCGCGCTAAG TGCGATGATC GTTGGCGGCG TGCTGTATGC CGTACTCGCG
ACGCTGAATA TTCAGTACCT GGGCTTCCAC CCTATCGTGC CCTCGTTACT ACTAAGTTTG
CTGGCTTTCC TGGTCGGAAA CCGTTTCGGT ACATCCGTCC CGCAAGCTAC CGTTTTGACT
ACTGATAAAT AA
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| Protein sequence | MQLEVILPLV AYLVVVFGIS VYAMRKRSTG TFLNEYFLGS RSMGGIVLAM TLTATYISAS
SFIGGPGAAY KYGLGWVLLA MIQLPAVWLS LGILGKKFAI LARRYNAVTL NDMLFARYQS
RLLVWLASLS LLVAFVGAMT VQFIGGARLL ETAAGIPYET GLLIFGISIA LYTAFGGFRA
SVLNDTMQGL VMLIGTVVLL IGVVHAAGGL SNAVETLQTI DPQLVTPQGA DDILSPAFMT
SFWVLVCFGV IGLPHTAVRC ISYKDSKAVH RGIIIGTIVV AILMFGMHLA GALGRAVIPD
LTVPDLVIPT LMVKVLPPFA AGIFLAAPMA AIMSTINAQL LQSSATIIKD LYLNIRPDQM
QNETRLKRMS AVITLVLGAL LLLAAWKPPE MIIWLNLLAF GGLEAVFLWP LVLGLYWERA
NAKGALSAMI VGGVLYAVLA TLNIQYLGFH PIVPSLLLSL LAFLVGNRFG TSVPQATVLT
TDK
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