Gene SbBS512_E3636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3636 
SymbolgatY 
ID6270904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3383850 
End bp3384704 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content48% 
IMG OID641727503 
Producttagatose-bisphosphate aldolase 
Protein accessionYP_001881945 
Protein GI187730500 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01858] class II aldolase, tagatose bisphosphate family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00921436 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACATCA TTTCAAGCAA AAACATGCTG AAAAAAGCCC AGTCAGAGGG ATATGCCGTC 
CCCGCTTTCA ACATTCATAA CCTTGAAACT TTACAGGTAG TTGTTGAGAG CGCTGCACAA
CTTCGCTCTC CCGTTATGCT GGCGGGAACA CCCGGTACTT ATCGTTATGG TGGCGTGGGA
AGTTTAATTT CGTTAGTACA ATCGCTGGCT CGCGAGTACA ACCTGCCGTT AGTCCTGCAT
CTCGACCATC ATGAAGAGAG TGATGACATT TTTAACAAGG TTCGCGCAGG GATCCGTTCT
GTCATGATTG ATGGCTCCCA TTTGCCATTT GAAGACAACA TTGCGCGAGT GCAAGAAGTT
ACCACCTTTT GCCATCGCTT TGATGTTAGC GTTGAGGTCG AGCTAGGGCG TCTTGGCGGC
CAGGAGGACG ATCTGCTGGT GGATGAAAAA GATTCCGCTT ATACCTCACC AGCCGCAGCT
GCAGAGTTTG TTCAACGTAC CCAAATTGAC TCCCTGGCCG TAGCAATCGG CACAGCACAT
GGTTTATATG CGCATGAACC ACGACTGGAT TTTGTGCGGC TGGAACAGAT TCGTCAGCGA
GTGGAGATTC CACTGGTGTT GCATGGTGCT TCGGGCTTAT CAGAACAGGA CGTTCAGCAC
TGTATTCGCC GCGGTATTTG TAAAGTGAAT GTCGCGACAG AATTGAAAAT TGCGTTTGCC
GATGCGTTAA AAGGATATTT CTACAACAAT CCTGCGGCAA ATGATCCACG CCACTATATG
CAGCCCGCAA AGGCCGCCAT GAAAGAAGTC GTAACTCGTA TTATTGGTGT CTGTGGTAGT
GAAGGAAAAA TTTAA
 
Protein sequence
MYIISSKNML KKAQSEGYAV PAFNIHNLET LQVVVESAAQ LRSPVMLAGT PGTYRYGGVG 
SLISLVQSLA REYNLPLVLH LDHHEESDDI FNKVRAGIRS VMIDGSHLPF EDNIARVQEV
TTFCHRFDVS VEVELGRLGG QEDDLLVDEK DSAYTSPAAA AEFVQRTQID SLAVAIGTAH
GLYAHEPRLD FVRLEQIRQR VEIPLVLHGA SGLSEQDVQH CIRRGICKVN VATELKIAFA
DALKGYFYNN PAANDPRHYM QPAKAAMKEV VTRIIGVCGS EGKI