| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3618 |
|---|
| Symbol | |
|---|
| ID | 6270523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 3369979 |
|---|
| End bp | 3370497 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641727488 |
|---|
| Product | intracellular peptidase, PfpI family |
|---|
| Protein accession | YP_001881930 |
|---|
| Protein GI | 187730021 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGA AAATTGCCGT TTTAATCAGT GATGAATTTG AGGATTCAGA ATTTACTTCA
CCCGCAGACG AGTTCCGTAA AGCCGGACAC GAAGTAATTA CCATTGAAAA GCAAGCGGGT
AAAACGGTGA AAGGCAAAAA AGGAGAAGCC AGCGTGACCA TCGATAAATC CATCGATGAA
GTGACGCCAG CGGAGTTCGA TGCCCTGCTG CTACCGGGCG GCCATTCACC GGATTATCTG
CGTGGGGACA ACCGTTTTGT CACCTTTACC CGTGATTTTG TGAATAGCGG CAAACCTGTT
TTCGCCATCT GTCACGGTCC GCAGCTGCTG ATCAGCGCCG ATGTGATTCG GGGGCGCAAA
CTGACCGCAG TTAAACCGAT CATTATTGAT GTTAAAAATG CGGGCGCGGA ATTTTACGAT
CAGGAAGTCG TGGTTGATAA AGATCAGCTG GTTACCAGCC GGACACCGGA CGATCTGCCA
GCGTTTAACC GCGAGGCGTT ACGCCTGCTC GGTGCCTGA
|
|---|
| Protein sequence | MSKKIAVLIS DEFEDSEFTS PADEFRKAGH EVITIEKQAG KTVKGKKGEA SVTIDKSIDE
VTPAEFDALL LPGGHSPDYL RGDNRFVTFT RDFVNSGKPV FAICHGPQLL ISADVIRGRK
LTAVKPIIID VKNAGAEFYD QEVVVDKDQL VTSRTPDDLP AFNREALRLL GA
|
|---|
| |