| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3614 |
|---|
| Symbol | |
|---|
| ID | 6270808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 3367006 |
|---|
| End bp | 3367986 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641727483 |
|---|
| Product | peptidase, U32 family |
|---|
| Protein accession | YP_001881925 |
|---|
| Protein GI | 187732504 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTGC TCTGCCCTGC CGGAAATCTC CCGGCGCTTA AGGCGGCCAT CGAAAACGGC
GCAGATGCTG TTTATATCGG GCTAAAAGAT GATACCAATG CCCGTCACTT CGCCGGCCTT
AACTTTACCG AGAAAAAATT GCAGGAAGCG GTGAGTTTTG TCCATCAACA TCGCCGCAAA
CTTCACATCG CGATTAACAC TTTTGCGCAT CCGGACGGTT ACGCCCGTTG GCAGCGCGCC
GTGGATATGG CGGCGCAGCT GGGTGCCGAC GCGCTGATCC TCGCCGACCT CGCCATGCTG
GAATACGCCG CCGAGCGTTA TCCGAATATT GAGCGCCACG TATCGGTGCA GGCTTCGGCG
ACCAATGAAG AGGCGATTAA CTTTTATCAT CGCCATTTTG ACGTTGCCCG CGTGGTGCTG
CCGCGCGTGT TGTCGATTCA TCAGGTGAAA CAGCTGGCAC GGGTCACACC TGTACCACTG
GAAGTGTTTG CTTTCGGCAG CCTGTGCATT ATGTCGGAAG GCCGTTGCTA TCTGTCGTCG
TATCTGACGG GTGAGTCGCC TAACACCGTG GGCGCGTGTT CTCCGGCCCG TTTCGTGCGC
TGGCAACAAA CGCCGCAGGG GCTGGAATCC CGCCTGAACG AAGTGCTGAT CGACCGTTAT
CAGGACGGCG AAAACGCAGG TTATCCGACG CTGTGTAAAG GGCGTTATCT GGTGGACGGC
GAGCGCTATC ACGCGCTGGA AGAACCAACC AGTCTCAATA CCCTGGAACT GCTGCCGGAG
TTAATGGCGG CGAATATTGC TTCGGTGAAA ATTGAAGGCC GCCAGCGTAG CCCGGCGTAT
GTCAGCCAGG TGGCGAAAGT CTGGCGTCAG GCTATCGACC GTTGTAAGGC CGATCCGCAA
AGCGCGTGGA TGGAGACGCT CGGGTCGATG TCCGAAGGCA CGCAGACCAC CCTTGGCGCG
TATCACCGTA AATGGCAGTG A
|
|---|
| Protein sequence | MELLCPAGNL PALKAAIENG ADAVYIGLKD DTNARHFAGL NFTEKKLQEA VSFVHQHRRK
LHIAINTFAH PDGYARWQRA VDMAAQLGAD ALILADLAML EYAAERYPNI ERHVSVQASA
TNEEAINFYH RHFDVARVVL PRVLSIHQVK QLARVTPVPL EVFAFGSLCI MSEGRCYLSS
YLTGESPNTV GACSPARFVR WQQTPQGLES RLNEVLIDRY QDGENAGYPT LCKGRYLVDG
ERYHALEEPT SLNTLELLPE LMAANIASVK IEGRQRSPAY VSQVAKVWRQ AIDRCKADPQ
SAWMETLGSM SEGTQTTLGA YHRKWQ
|
|---|
| |