Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3608 |
Symbol | nlpI |
ID | 6272648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3360437 |
End bp | 3361321 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641727478 |
Product | lipoprotein NlpI |
Protein accession | YP_001881920 |
Protein GI | 187731799 |
COG category | [R] General function prediction only |
COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCTT TTTTGCGCTG GTGTTTCGTT GCGACAGCAC TTACGCTTGC AGGATGCAGT AATACTTCCT GGCGTAAAAG TGAAGTCCTC GCGGTACCAT TGCAACCGAC TTTACAGCAG GAAGTGATTC TGGCACGTAT GGAACAAATC CTTGCCAGTC GGGCTTTAAC CGATGACGAA CGCGCACAGC TTTTATATGA GCGCGGAGTG TTGTATGATA GTCTCGGTCT GAGGGCATTA GCGCGTAACG ATTTTTCGCA AGCGCTGGCA ATCCGACCGG ATATGCCTGA AGTGTTCAAT TACTTAGGCA TATATTTAAC GCAGGCAGGC AATTTTGATG CTGCCTATGA AGCGTTTGAT TCTGTACTTG AGCTTGATCC AACTTACAAC TACGCGCACT TGAATCGCGG GATCGCATTA TATTACGGCG GTCGTGACAA GTTAGCGCAA GATGATCTGC TGGCGTTTTA TCAAGACGAT CCCAATGATC CTTTCCGTAG TCTGTGGCTT TATCTCGCCG AGCAGAAGCT CGATGAGAAG CAGGCTAAAG AAGTGTTGAA ACAGCACTTC GAAAAATCGG ATAAGGAACA GTGGGGATGG AACATTGTCG AGTTCTACCT GGGCAACATT AGCGAACAAA CGTTAATGGA AAGGCTCAAG GCGGACGCAA CGGATAACAC CTCGCTCGCT GAGCATCTCA GTGAAACCAA CTTCTATTTA GGTAAGTACT ACCTAAGTCT GGGGGATTTG GACAGCGCCA CGGCCCTGTT CAAACTGGCG GTTGTCAACA ACGTTCATAA CTTTGTTGAG CACCGATACG CATTGTTGGA ATTATCGCTC CTGGGCCAGG ACCAAGATGA CCTGGCAGAA TCGGACCAGC AATAG
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Protein sequence | MKPFLRWCFV ATALTLAGCS NTSWRKSEVL AVPLQPTLQQ EVILARMEQI LASRALTDDE RAQLLYERGV LYDSLGLRAL ARNDFSQALA IRPDMPEVFN YLGIYLTQAG NFDAAYEAFD SVLELDPTYN YAHLNRGIAL YYGGRDKLAQ DDLLAFYQDD PNDPFRSLWL YLAEQKLDEK QAKEVLKQHF EKSDKEQWGW NIVEFYLGNI SEQTLMERLK ADATDNTSLA EHLSETNFYL GKYYLSLGDL DSATALFKLA VVNNVHNFVE HRYALLELSL LGQDQDDLAE SDQQ
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