Gene SbBS512_E3592 details

Gene Information

• Locus tag: SbBS512_E3592
• Symbol: hflB
• ID: 6268739
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3341641
• End bp: 3343584
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641727462
• Product: ATP-dependent metalloprotease
• Protein accession: YP_001881907
• Protein GI: 187731936
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000000114537
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGTGACA TGGCGAAAAA CCTAATACTC TGGCTGGTCA TTGCCGTTGT GCTGATGTCC 
GTATTCCAGA GCTTTGGGCC CAGCGAGTCT AATGGCCGTA AGGTGGATTA CTCTACCTTC 
CTACAAGAGG TCAATAACGA CCAGGTTCGT GAAGCGCGTA TCAACGGACG TGAAATCAAC 
GTTACCAAGA AAGATAGTAA CCGTTATACC ACTTACATTC CGGTTCAGGA TCCGAAATTA 
CTGGATAACC TGTTGACCAA GAACGTCAAG GTTGTCGGTG AACCGCCTGA AGAACCAAGC 
CTGCTGGCTT CTATCTTCAT CTCTTGGTTC CCGATGCTGT TGCTGATTGG TGTCTGGATC 
TTCTTCATGC GTCAAATGCA GGGCGGCGGT GGCAAAGGTG CCATGTCGTT TGGTAAGAGC 
AAAGCGCGCA TGCTGACGGA AGATCAGATC AAAACGACCT TTGCTGACGT TGCGGGCTGC 
GACGAAGCAA AAGAAGAAGT TGCTGAACTG GTAGAGTATC TGCGCGAGCC GAGCCGCTTC 
CAGAAACTCG GCGGTAAGAT CCCGAAAGGC GTCCTGATGG TCGGTCCTCC GGGTACCGGT 
AAAACGTTGC TGGCGAAAGC GATTGCAGGC GAAGCGAAAG TTCCGTTCTT TACTATCTCC 
GGTTCTGACT TCGTAGAAAT GTTCGTCGGT GTGGGTGCAT CCCGTGTTCG TGACATGTTC 
GAACAGGCGA AGAAAGCGGC ACCGTGCATC ATCTTTATCG ATGAAATCGA CGCCGTAGGC 
CGCCAGCGTG GCGCTGGTCT GGGCGGTGGT CACGATGAAC GTGAACAGAC TCTGAACCAG 
ATGCTGGTTG AGATGGATGG CTTCGAAGGT AACGAAGGTA TCATCGTTAT CGCCGCGACT 
AACCGTCCGG ACGTTCTTGA CCCGGCCCTG CTGCGTCCTG GCCGTTTCGA CCGTCAGGTT 
GTGGTTGGCT TGCCAGATGT TCGCGGTCGT GAGCAGATCC TGAAAGTTCA CATGCGTCGC 
GTACCATTGG CACCCGATAT CGACGCGGCA ATCATTGCCC GTGGTACTCC TAGTTTCTCC 
GGTGCTGACC TGGCGAACCT GGTAAACGAA GCGGCACTGT TCGCTGCTCG TGGCAACAAA 
CGCGTTGTGT CGATGATTGA GTTCGAAAAA GCGAAAGATA AAATCATGAT GGGTGCGGAA 
CGTCGCTCCA TGGTGATGAC GGAAGCGCAG AAAGAATCGA CGGCTTACCA CGAAGCGGGT 
CATGCGATTA TCGGTCGCCT GGTGCCGGAA CACGATCCGG TGCACAAAGT GACGATTATC 
CCACGCGGTC GTGCGCTGGG TGTGACTTTC TTCTTGCCTG AGGGCGACGC AATCAGCGCC 
AGCCGTCAGA AACTGGAAAG CCAGATTTCT ACGCTGTACG GTGGTCGTCT GGCAGAAGAG 
ATCATCTACG GGCCGGAACA TGTTTCTACC GGTGCGTCCA ACGATATTAA AGTTGCGACC 
AACCTGGCGC GTAACATGGT GACTCAGTGG GGCTTCTCTG AGAAATTGGG TCCACTGCTG 
TACGCGGAAG AAGAAGGTGA AGTGTTCCTC GGCCGTAGCG TAGCAAAAGC GAAACATATG 
TCCGATGAAA CTGCACGTAT CATCGACCAG GAAGTGAAAG CACTGATTGA GCGTAACTAT 
AATCGTGCGC GTCAGCTTCT GACCGACAAT ATGGATATTC TGCATGCGAT GAAAGATGCT 
CTCATGAAAT ATGAGACTAT CGACGCACCG CAGATTGATG ACCTGATGGC ACGTCGCGAT 
GTACGTCCGC CAGCGGGCTG GGAAGAACCA GGCGCTTCTA ACAATTCTGG CGACAATGGT 
AGTCCAAAGG CTCCTCGTCC GGTTGATGAA CCGCGTACGC CGAACCCGGG TAACACCATG 
TCAGAGCAGT TAGGCGACAA GTAA 

 

Protein sequence

MSDMAKNLIL WLVIAVVLMS VFQSFGPSES NGRKVDYSTF LQEVNNDQVR EARINGREIN 
VTKKDSNRYT TYIPVQDPKL LDNLLTKNVK VVGEPPEEPS LLASIFISWF PMLLLIGVWI 
FFMRQMQGGG GKGAMSFGKS KARMLTEDQI KTTFADVAGC DEAKEEVAEL VEYLREPSRF 
QKLGGKIPKG VLMVGPPGTG KTLLAKAIAG EAKVPFFTIS GSDFVEMFVG VGASRVRDMF 
EQAKKAAPCI IFIDEIDAVG RQRGAGLGGG HDEREQTLNQ MLVEMDGFEG NEGIIVIAAT 
NRPDVLDPAL LRPGRFDRQV VVGLPDVRGR EQILKVHMRR VPLAPDIDAA IIARGTPSFS 
GADLANLVNE AALFAARGNK RVVSMIEFEK AKDKIMMGAE RRSMVMTEAQ KESTAYHEAG 
HAIIGRLVPE HDPVHKVTII PRGRALGVTF FLPEGDAISA SRQKLESQIS TLYGGRLAEE 
IIYGPEHVST GASNDIKVAT NLARNMVTQW GFSEKLGPLL YAEEEGEVFL GRSVAKAKHM 
SDETARIIDQ EVKALIERNY NRARQLLTDN MDILHAMKDA LMKYETIDAP QIDDLMARRD 
VRPPAGWEEP GASNNSGDNG SPKAPRPVDE PRTPNPGNTM SEQLGDK