Gene SbBS512_E3591 details

Gene Information

• Locus tag: SbBS512_E3591
• Symbol: rrmJ
• ID: 6272165
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3340921
• End bp: 3341550
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641727461
• Product: 23S rRNA methyltransferase J
• Protein accession: YP_001881906
• Protein GI: 187730342
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0293] 23S rRNA methylase
• TIGRFAM ID: [TIGR00438] cell division protein FtsJ

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 4.71246e-16
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGGTA AGAAGCGTTC TGCCAGCTCC AGCCGCTGGC TTCAGGAACA CTTTAGCGAT 
AAATATGTTC AACAGGCACA GAAAAAGGGG TTACGTTCCC GTGCCTGGTT TAAACTTGAT 
GAAATACAGC AAAGTGACAA ACTCTTTAAA CCGGGAATGA CGGTTGTCGA CCTTGGTGCT 
GCTCCGGGTG GTTGGTCACA ATATGTGGTC ACCCAAATTG GCGGCAAAGG CCGCATCATC 
GCTTGCGATC TTTTACCTAT GGATCCTATC GTTGGTGTGG ACTTTCTTCA GGGCGATTTT 
CGTGATGAAC TGGTGATGAA AGCACTGCTG GAGCGCGTTG GCGACAGCAA AGTCCAGGTT 
GTCATGTCCG ATATGGCACC AAACATGAGC GGAACACCGG CGGTGGATAT CCCCCGTGCC 
ATGTATCTGG TGGAACTGGC GTTAGAAATG TGTCGTGATG TATTAGCGCC AGGTGGCAGT 
TTTGTAGTGA AGGTGTTCCA GGGCGAAGGT TTCGATGAGT ATCTAAGGGA AATTCGCTCC 
CTGTTTACGA AGGTCAAAGT TCGTAAGCCG GACTCTTCTC GTGCACGTTC GCGGGAAGTG 
TATATTGTAG CGACCGGGCG TAAACCCTAA 

 

Protein sequence

MTGKKRSASS SRWLQEHFSD KYVQQAQKKG LRSRAWFKLD EIQQSDKLFK PGMTVVDLGA 
APGGWSQYVV TQIGGKGRII ACDLLPMDPI VGVDFLQGDF RDELVMKALL ERVGDSKVQV 
VMSDMAPNMS GTPAVDIPRA MYLVELALEM CRDVLAPGGS FVVKVFQGEG FDEYLREIRS 
LFTKVKVRKP DSSRARSREV YIVATGRKP