| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3583 |
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| Symbol | ispB |
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| ID | 6268758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3334049 |
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| End bp | 3335020 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641727453 |
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| Product | octaprenyl diphosphate synthase |
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| Protein accession | YP_001881898 |
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| Protein GI | 187730997 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000015877 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAG AAAAAATCAA TGAGTTAACC GCGCAAGATA TGGCGGGTGT TAATGCGGCA
ATCCTTGAGC AGCTTAATTC CGACGTCCAA CTGATCAATC AGTTAGGCTA TTACATCGTC
AGCGGCGGCG GTAAACGTAT TCGTCCGATG ATTGCTGTAC TGGCTGCACG AGCTGTTGGC
TATGAGGGAA ATGCGCATGT CACCATTGCT GCCCTGATCG AGTTTATCCA CACGGCGACT
CTGCTACACG ACGACGTTGT GGATGAATCA GATATGCGCA GGGGTAAAGC TACCGCCAAC
GCTGCATTTG GCAATGCCGC CAGCGTGCTG GTAGGCGATT TTATTTATAC CCGCGCGTTC
CAGATGATGA CCAGCCTCGG TTCACTCAAA GTGCTGGAAG TCATGTCAGA AGCTGTAAAC
GTCATCGCAG AAGGTGAAGT TCTGCAACTG ATGAACGTTA ACGATCCGGA CATCACTGAA
GAAAACTACA TGCGCGTTAT CTATAGTAAA ACCGCGCGTC TGTTTGAGGC TGCCGCGCAG
TGTTCCGGGA TTCTGGCTGG CTGTACGCCG GAGGAGGAGA AAGGCCTGCA GGATTATGGG
CGCTATCTCG GCACTGCTTT CCAGTTGATC GACGATTTAC TCGATTACAA TGCCGATGGC
GAACAGTTAG GTAAAAACGT CGGCGACGAT CTGAACGAAG GTAAACCGAC GCTGCCGCTG
CTGCATGCGA TGCATCATGG CACACCAGAA CAGGCACAGA TGATCCGTAC CGCCATCGAA
CAGGGTAACG GTCGCCATCT TCTGGAACCG GTTCTGGAAG CAATGAACGC TTGTGGATCT
CTTGAATGGA CGCGTCAGCG CGCCGAGGAA GAAGCAGACA AAGCCATCGC AGCGTTACAG
GTGCTCCCGG ACACCCCTTG GCGAGAAGCA CTCATCGGCC TCGCGCACAT CGCTGTTCAA
CGCGATCATT AA
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| Protein sequence | MNLEKINELT AQDMAGVNAA ILEQLNSDVQ LINQLGYYIV SGGGKRIRPM IAVLAARAVG
YEGNAHVTIA ALIEFIHTAT LLHDDVVDES DMRRGKATAN AAFGNAASVL VGDFIYTRAF
QMMTSLGSLK VLEVMSEAVN VIAEGEVLQL MNVNDPDITE ENYMRVIYSK TARLFEAAAQ
CSGILAGCTP EEEKGLQDYG RYLGTAFQLI DDLLDYNADG EQLGKNVGDD LNEGKPTLPL
LHAMHHGTPE QAQMIRTAIE QGNGRHLLEP VLEAMNACGS LEWTRQRAEE EADKAIAALQ
VLPDTPWREA LIGLAHIAVQ RDH
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