| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3578 |
|---|
| Symbol | ttg2D |
|---|
| ID | 6272687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 3330839 |
|---|
| End bp | 3331474 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641727448 |
|---|
| Product | toluene tolerance protein Ttg2D |
|---|
| Protein accession | YP_001881893 |
|---|
| Protein GI | 187732799 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.306027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAC GTTTAATGAT GGTCGCTTTG CTGGTGATTG CACCGCTGAG TGCGGCAACC
GCGGCAGACC AGACCAATCC TTATAAGCTG ATGGACGAGG CGGCGCAGAA AACGTTCGAT
CGCCTGAAGA ATGAGCAACC GCAAATTCGG GCCAACCCGG ATTATCTGCG TACCATTGTT
GATCAGGAAC TGCTGCCATA CGTACAGGTG AAATACGCCG GTGCGCTGGT GCTGGGCCAG
TATTACAAGA GTGCGACCCC TGCTCAACGT GAAGCCTACT TTGCCGCTTT CCGTGAGTAC
CTGAAGCAGG CTTACGGTCA GGCGCTGGCG ATGTATCACG GTCAAACCTA TCAGATTGCG
CCAGAACAGC CGCTGGGCGA TAAAACCATT GTGCCGATTC GCGTTACCAT TATTGATCCG
AATGGCCGCC CGCCGGTGCG TCTGGACTTC CAGTGGCGTA AAAACTCCCA GACGGGCAAC
TGGCAGGCTT ACGACATGAT TGCTGAAGGC GTCAGTATGA TCACCACCAA ACAAAACGAG
TGGGGAACGC TGCTGCGTAC CAAAGGTATC GACGGCCTGA CTGCGCAACT GAAATCGATT
TCTCAACAGA AAATCACTCT GGAAGAGAAA AAATAA
|
|---|
| Protein sequence | MFKRLMMVAL LVIAPLSAAT AADQTNPYKL MDEAAQKTFD RLKNEQPQIR ANPDYLRTIV
DQELLPYVQV KYAGALVLGQ YYKSATPAQR EAYFAAFREY LKQAYGQALA MYHGQTYQIA
PEQPLGDKTI VPIRVTIIDP NGRPPVRLDF QWRKNSQTGN WQAYDMIAEG VSMITTKQNE
WGTLLRTKGI DGLTAQLKSI SQQKITLEEK K
|
|---|
| |