Gene SbBS512_E3572 details

Gene Information

• Locus tag: SbBS512_E3572
• Symbol: kdsC
• ID: 6271144
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 3325891
• End bp: 3326457
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641727442
• Product: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
• Protein accession: YP_001881887
• Protein GI: 187730119
• COG category: [R] General function prediction only
• COG ID: [COG1778] Low specificity phosphatase (HAD superfamily)
• TIGRFAM ID: [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA; [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 0.694845
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAAG CAGGTGCGTC GCTTGCGACC TGTTACGGCC CTGTCAGCGC CGACGTTATA 
GCAAAAGCAG AGAACATTCG TCTGCTGATC CTCGACGTTG ATGGCGTACT GTCAGATGGC 
CTGATTTATA TGGGCAATAA CGGCGAAGAG CTGAAAGCGT TCAATGTTCG TGACGGTTAT 
GGCATTCGTT GTGCGCTCAC CTCTGATATT GAAGTCGCTA TCATTACCGG GCGAAAGGCT 
AAACTGGTAG AAGATCGTTG TGCCACATTG GGGATCACTC ACTTGTATCA GGGGCAGTCA 
AACAAACTGA TCGCCTTTAG CGATCTGCTG GAAAAACTGG CGATTGCCCC GGAAAATGTG 
GCTTATGTCG GCGATGATCT CATCGACTGG CCGGTAATGG AAAAAGTGGG TTTAAGCGTC 
GCCGTGGCCG ATGCTCATCC ACTGTTGATC CCGCGCGCCG ATTATGTGAC GCGCATTGCT 
GGCGGTTGTG GCGCAGTGCG AGAAGTTTGC GACTTATTAC TCCTGGCGCA GGGCAAACTG 
GATGAAGCCA AAGGGCAATC GATATGA 

 

Protein sequence

MSKAGASLAT CYGPVSADVI AKAENIRLLI LDVDGVLSDG LIYMGNNGEE LKAFNVRDGY 
GIRCALTSDI EVAIITGRKA KLVEDRCATL GITHLYQGQS NKLIAFSDLL EKLAIAPENV 
AYVGDDLIDW PVMEKVGLSV AVADAHPLLI PRADYVTRIA GGCGAVREVC DLLLLAQGKL 
DEAKGQSI