Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3558 |
Symbol | gltB |
ID | 6269083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3309518 |
End bp | 3313978 |
Gene Length | 4461 bp |
Protein Length | 1486 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641727428 |
Product | glutamate synthase subunit alpha |
Protein accession | YP_001881874 |
Protein GI | 187733965 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTACG ATAAATCCCT TGAGAGGGAT AACTGTGGTT TCGGCCTGAT CGCCCACATA GAAGGCGAAC CTAGCCACAA GGTAGTGCGT ACTGCAATAC ACGCACTGGC CCGCATGCAG CACCGTGGCG CGATTCTCGC CGATGGTAAA ACCGGTGACG GTTGCGGCTT GCTGTTACAA AAACCGGATC GCTTTTTTCG CATCGTTGCG CAGGAGCGCG GCTGGCGTTT AGCAAAAAAC TACGCTGTCG GGATGCTCTT CCTGAATAAA GATCCTGAAC TCGCGGCTGC CGCACGCCGC ATCGTTGAAG AAGAGCTGCA ACGCGAAACC TTGTCGATTG TGGGCTGGCG TGATGTCCCC ACTAACGAAG GCGTGCTGGG TGAAATCGCC CTCTCCTCTC TGCCCCGCAT TGAGCAAATT TTCGTTAACG CTCCGGCAGG CTGGCGTCCG CGGGATATGG AGCGCCGTCT GTTTATCGCC CGCCGCCGCA TTGAAAAGCG TCTCGAAGCC GACAAAGACT TCTACGTCTG TAGCCTGTCG AATCTGGTGA ACATCTATAA AGGTCTGTGT ATGCCGGCGG ATCTGCCGCG CTTTTATCTG GATCTTGCGG ACCTGCGTCT GGAATCGGCC ATCTGCCTGT TCCACCAGCG CTTCTCCACT AACACCGTAC CGCGCTGGCC GCTGGCGCAG CCGTTCCGCT ACCTGGCGCA TAACGGTGAA ATCAACACCA TCACCGGTAA CCGCCAATGG GCGCGTGCGC GTACCTATAA ATTCCAGACG CCGCTTATCC CTGATCTGCA CGACGCCGCA CCGTTCGTCA ACGAAACCGG CTCTGACTCC AGTTCGATGG ATAACATGCT GGAACTGCTG CTGGCAGGCG GGATGGATAT CATCCGCGCC ATGCGTCTGT TAGTGCCACC CGCCTGGCAG AACAACCCGG ATATGGACCC GGAACTGCGT GCCTTCTTTG ACTTTAACTC CATGCATATG GAGCCGTGGG ATGGCCCGGC GGGCATCGTG ATGTCCGACG GTCGTTTTGC CGCCTGTAAC CTCGACCGTA ACGGTCTGCG TCCGGCGCGC TACGTCATCA CCAAAGATAA GCTCATCACC TGCGCCTCTG AAGTCGGTAT CTGGGATTAC CAGCCTGACG AAGTGGTCGA AAAAGGCCGC GTCGGGCCAG GCGAACTGAT GGTTATCGAC ACCCGCAGTG GGCGTATTCT GCACTCGGCA GAAACCGATG ACGATCTGAA AAGCCGCCAT CCATATAAAG AGTGGATGGA GAAAAACGTC CGCCGACTGG TACCGTTTGA AGATCTGCCC GATGAAGAAG TGGGTAGCCG CGAACTGGAC GACGACACGC TTGCCAGCTA CCAGAAACAG TTTAACTACA GCGCGGAAGA GCTGGACTCC GTAATTCGCG TACTGGGCGA AAACGGTCAG GAAGCGGTCG GTTCGATGGG CGATGATACC CCATTCGCCG TGCTCTCCAG TCAGCCGCGC ATTATTTACG ACTACTTCCG CCAGCAGTTT GCCCAGGTGA CTAACCCGCC AATCGACCCG CTGCGTGAAG CGCATGTTAT GTCGCTCGCC ACCAGTATCG GTCGTGAAAT GAACGTCTTT TGCGAAGCAG AGGGCCAGGC GCACCGTTTA AGCTTTAAAT CGCCGATTCT GCTCTACTCC GATTTCAAAC AGCTCACGAC GATGAAAGAG GAGCACTACC GCGCAGATAC GCTGGATATC ACCTTTGACG TCACTAAAAC CACGCTCGAA GCGACAGTCA AAGAGCTGTG CGACAAAGCC GAAAAAATGG TACGTAGCGG CACCGTGCTG CTGGTGCTCT CCGACCGGAA TATCGCTAAA GATCGCCTGC CGGTTCCAGC CCCGATGGCG GTTGGCGCGA TCCAGACCCG TCTGGTCGAT CAAAGCCTGC GTTGCGATGC CAACATCATC GTCGAAACCG CCAGCGCCCG CGATCCGCAC CACTTCGCCG TGTTGCTGGG CTTCGGCGCG ACGGCTATTT ATCCATACCT TGCCTATGAA ACGCTGGGCC GCCTGGTAGA CACCCATGCG ATTGCCAAAG ATTATCGTAC CGTGATGCTC AACTACCGTA ACGGCATCAA CAAAGGCTTG TACAAAATCA TGTCCAAAAT GGGCATCTCC ACCATCGCCT CTTACCGCTG CTCGAAACTG TTTGAAGCGG TCGGTCTGCA CGATGATGTA GTGGGCCTGT GCTTCCAGGG GACGGTCAGC CGCATTGGTG GGGCGAGCTT TGAAGACTTC CAGCAGGATC TGCTGAACCT GTCGAAACGT GCCTGGCTGG CGCGTAAGCC CATCAGCCAG GGCGGCCTGC TGAAATACGT CCACGGCGGC GAATACCACG CTTACAACCC GGACGTGGTG CGCACGCTGC AACAGGCGGT ACAAAGCGGC GAGTACAGCG ACTATCAGGA ATACGCGAAG CTGGTTAATG AGCGTCCGGC AACCACGCTG CGCGATCTGC TGGCAATTAC GCCGGGTGAA AACGCGGTCA ACATTGCTGA TGTTGAACCG GCAAGCGAAC TGTTTAAACG CTTTGATACC GCCGCGATGT CTATCGGCGC GTTAAGCCCG GAAGCCCACG AGGCGCTGGC GGAAGCGATG AATAGCATCG GCGGTAACTC GAACTCCGGT GAAGGCGGCG AAGACCCGGC GCGCTATGGC ACTAACAAAG TGTCGCGCAT CAAGCAGGTG GCTTCTGGTC GCTTCGGCGT TACTCCGGCG TATCTGGTCA ATGCCGACGT CATTCAGATT AAAGTCGCCC AGGGCGCGAA GCCGGGCGAA GGCGGTCAGT TGCCGGGTGA CAAAGTCACT CCTTACATCG CCAAACTGCG CTATTCGGTG CCCGGAGTGA CGCTGATCTC CCCGCCGCCG CACCACGATA TCTACTCTAT CGAGGACTTA GCGCAGCTCA TTTTCGACCT CAAGCAGGTT AACCCGAAAG CGATGATCTC CGTGAAGCTG GTTTCCGAAC CGGGCGTAGG CACCATCGCG ACTGGTGTGG CAAAAGCTTA TGCCGATTTA ATCACCATCG CAGGCTATGA CGGTGGCACC GGCGCAAGCC CGCTGTCGTC AGTGAAATAC GCAGGTTGCC CGTGGGAGCT GGGGCTTGTT GAAACCCAGC AGGCGCTGGT TGCCAATGGT CTGCGTCATA AGATCCGTTT GCAGGTCGAT GGCGGCCTGA AAACCGGTGT TGATATCATC AAAGCGGCGA TTCTCGGCGC AGAAAGCTTC GGCTTCGGCA CTGGCCCAAT GGTCGCGCTC GGCTGTAAAT ATCTGCGTAT TTGCCACCTG AACAACTGCG CAACGGGTGT GGCAACTCAG GATGACAAAC TGCGTAAGAA TCACTATCAC GGCCTGCCGT TCAAGGTGAC GAATTACTTT GAGTTTATCG CCCGTGAAAC CCGCGAGCTG ATGGCACAGC TGGGGGTAAC GCGGCTGGTG GATCTGATTG GTCGCACCGA CCTGCTGAAA GAGCTGGACG GTTTCACCGC CAAACAGCAG AAACTGGCGC TGTCGAAGCT GCTGGAGACC GCCGAACCGC ATCTAGGTAA GGCACTCTAC TGCACCGAAA ACAACCCGCC GTTTGATAAC GGCCTGCTGA ACGCGCAGTT GCTGCAACAG GCGAAACCGT TTGTCGATGG ACGCCAGAGC AAAACCTTCT GGTTCGATAT CCGCAATACC GATCGCTCCG TGGGCGCGTC GCTTTCAGGC TATATCGCCC AGACGCACGG CGATCAGGGG CTGGCAGCCG ATCCTATCAA AGCGTACTTC AACGGCACCG CAGGCCAGAG TTTCGGTGTA TGGAACGCGG GCGGCGTGGA ACTGTACCTG ACCGGGGATG CCAACGACTA TGTCGGTAAA GGCATGGCGG GCGGCTTAAT CGCCATTCGT CCTCCGGTTG GTTCCGCCTT CCGCAGCCAT GAAGCAAGTA TTATCGGCAA CACCTGCCTG TATGGCGCGA CCGGTGGTCG TCTGTATGCC GCAGGCCGCG CGGGTGAACG TTTCGGCGTG CGGAACTCCG GTGCTATCAC CGTGGTAGAA GGCATTGGCG ACAACGGCTG TGAATATATG ACGGGCGGTA TTGTCTGTAT TCTGGGTAAA ACCGGCGTTA ACTTCGGTGC GGGCATGACC GGCGGCTTCG CTTACGTTCT CGATGAAAGC GGTGATTTCC GCAAACGCGT TAACCCGGAA CTGGTCGAGG TCTTAAACGT TGACGATCTG GCGATCCATG AAGAGCATCT GCGCGGTCTT ATCACCGAGC ATGTTCAGCA TACTGGCTCT CAGCGCGGTG AAGAGATTCT GGCGAACTGG TCAACCTTCG CCACTAAATT TGCGCTGGTT AAACCGAAGT CCAGTGATGT AAAAGCACTG CTGGGTCACC GTAGTCGTAG CGCAGCAGAG TTGCGCGTGC AGGCGCAGTA A
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Protein sequence | MLYDKSLERD NCGFGLIAHI EGEPSHKVVR TAIHALARMQ HRGAILADGK TGDGCGLLLQ KPDRFFRIVA QERGWRLAKN YAVGMLFLNK DPELAAAARR IVEEELQRET LSIVGWRDVP TNEGVLGEIA LSSLPRIEQI FVNAPAGWRP RDMERRLFIA RRRIEKRLEA DKDFYVCSLS NLVNIYKGLC MPADLPRFYL DLADLRLESA ICLFHQRFST NTVPRWPLAQ PFRYLAHNGE INTITGNRQW ARARTYKFQT PLIPDLHDAA PFVNETGSDS SSMDNMLELL LAGGMDIIRA MRLLVPPAWQ NNPDMDPELR AFFDFNSMHM EPWDGPAGIV MSDGRFAACN LDRNGLRPAR YVITKDKLIT CASEVGIWDY QPDEVVEKGR VGPGELMVID TRSGRILHSA ETDDDLKSRH PYKEWMEKNV RRLVPFEDLP DEEVGSRELD DDTLASYQKQ FNYSAEELDS VIRVLGENGQ EAVGSMGDDT PFAVLSSQPR IIYDYFRQQF AQVTNPPIDP LREAHVMSLA TSIGREMNVF CEAEGQAHRL SFKSPILLYS DFKQLTTMKE EHYRADTLDI TFDVTKTTLE ATVKELCDKA EKMVRSGTVL LVLSDRNIAK DRLPVPAPMA VGAIQTRLVD QSLRCDANII VETASARDPH HFAVLLGFGA TAIYPYLAYE TLGRLVDTHA IAKDYRTVML NYRNGINKGL YKIMSKMGIS TIASYRCSKL FEAVGLHDDV VGLCFQGTVS RIGGASFEDF QQDLLNLSKR AWLARKPISQ GGLLKYVHGG EYHAYNPDVV RTLQQAVQSG EYSDYQEYAK LVNERPATTL RDLLAITPGE NAVNIADVEP ASELFKRFDT AAMSIGALSP EAHEALAEAM NSIGGNSNSG EGGEDPARYG TNKVSRIKQV ASGRFGVTPA YLVNADVIQI KVAQGAKPGE GGQLPGDKVT PYIAKLRYSV PGVTLISPPP HHDIYSIEDL AQLIFDLKQV NPKAMISVKL VSEPGVGTIA TGVAKAYADL ITIAGYDGGT GASPLSSVKY AGCPWELGLV ETQQALVANG LRHKIRLQVD GGLKTGVDII KAAILGAESF GFGTGPMVAL GCKYLRICHL NNCATGVATQ DDKLRKNHYH GLPFKVTNYF EFIARETREL MAQLGVTRLV DLIGRTDLLK ELDGFTAKQQ KLALSKLLET AEPHLGKALY CTENNPPFDN GLLNAQLLQQ AKPFVDGRQS KTFWFDIRNT DRSVGASLSG YIAQTHGDQG LAADPIKAYF NGTAGQSFGV WNAGGVELYL TGDANDYVGK GMAGGLIAIR PPVGSAFRSH EASIIGNTCL YGATGGRLYA AGRAGERFGV RNSGAITVVE GIGDNGCEYM TGGIVCILGK TGVNFGAGMT GGFAYVLDES GDFRKRVNPE LVEVLNVDDL AIHEEHLRGL ITEHVQHTGS QRGEEILANW STFATKFALV KPKSSDVKAL LGHRSRSAAE LRVQAQ
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