| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3552 |
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| Symbol | nanT1 |
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| ID | 6272640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3303466 |
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| End bp | 3304956 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641727422 |
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| Product | putative sialic acid transporter |
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| Protein accession | YP_001881868 |
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| Protein GI | 187734145 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00891] putative sialic acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACTA CAACCCAGAA TATCCCGTGG TATCGCCATC TCAACCGTGC ACAATGGCGC
GCATTTTCCG CTGCCTGGTT GGGATATCTG CTTGACGGTT TTGATTTCGT TTTAATCGCC
CTGGTACTCA CCGAAGTACA GGGTGAATTC GGGCTGACGA CGGTGCAGGC GGCAAGTCTG
ATCTCCGCAG CCTTTATCTC TCGCTGGTTC GGCGGCCTGA TGCTCGGCGC TATGGGTGAC
CGCTACGGGC GTCGTCTGGC AATGGTCACC AGCATCGTTC TCTTCTCGGC CGGGACGCTG
GCCTGCGGCT TTGCGCCAGG CTACATCACC ATGTTTATCG CGCGTCTGGT CATCGGCATG
GGGATGGCGG GTGAATACGG TTCCAGCGCC ACCTATGTCA TTGAAAGCTG GCCAAAACAT
CTGCGTAACA AAGCCAGTGG TTTTCTGATT TCAGGCTTCT CTGTGGGGGC CGTCGTTGCC
GCTCAGGTCT ATAGCCTGGT GGTTCCGGTC TGGGGCTGGC GTGCGCTGTT CTTTATCGGC
ATTTTGCCTA TCATCTTTGC TCTCTGGCTG CGTAAAAACA TCCCGGAAGC GGAAGACTGG
AAAGAGAAAC ATGCAGGTAA AGCACCAGTA CGCACGATGG TAGATATTCT CTACCGTGGT
GAACATCGCA TTGCCAATAT CGTAATGACA CTGGCGGCGG CTACTGCGCT GTGGTTTTGC
TTCGCCGGTA ACCTGCAAAA TGCCGCGATC GTCGCTGTTC TTGGGCTGTT ATGCGCCGCA
ATCTTTATCA GCTTTATGGT GCAAAGTACG GGTAAACGCT GGCCAACGGG CGTAATGCTG
ATGGTGGTCG TGTTGTTTGC TTTCCTCTAC TCATGGCCGA TTCAGGCGCT GCTGCCAACG
TATCTGAAAA CCGATCTGGC TTATAACCCG CATACTGTCG CCAATGTGCT GTTCTTTAGC
GGCTTTGGGG CTGCGGTGGG GTGCTGTGTC GGCGGCTTCC TCGGTGACTG GCTGGGAACC
CGCAAAGCCT ACGTTTGTAG CCTGTTGGCC TCGCAGCTGT TGATTATTCC GGTATTTGCG
ATTGGCGGCG CAAACGTCTG GGTGCTCGGT CTGTTACTGT TCTTCCAGCA AATGCTTGGA
CAAGGGATCG CCGGGATCTT ACCGAAACTG ATTGGCGGTT ATTTCGATAC CGACCAGCGT
GCAGCGGGCT TGGGCTTTAC CTACAACGTT GGCGCATTGG GCGGCGCACT GGCCCCAATC
ATCGGCGCGT TGATCGCTCA ACGTCTGGAT CTGGGTACTG CGCTGGCATC GCTATCGTTC
AGTCTGACAT TTGTGGTGAT CCTGCTGATT GGTCTGGATA TGCCTTCCCG CGTTCAGCGT
TGGCTGCGCC CGGAAGCATT GCGTACTCAT GACGCTATCG ACGGCAAACC ATTTAGCGGT
GCCGTGCCAT TTGGCAGCGC CAAAAACGAT TTAGTCAAAA CCAAAAGTTA A
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| Protein sequence | MSTTTQNIPW YRHLNRAQWR AFSAAWLGYL LDGFDFVLIA LVLTEVQGEF GLTTVQAASL
ISAAFISRWF GGLMLGAMGD RYGRRLAMVT SIVLFSAGTL ACGFAPGYIT MFIARLVIGM
GMAGEYGSSA TYVIESWPKH LRNKASGFLI SGFSVGAVVA AQVYSLVVPV WGWRALFFIG
ILPIIFALWL RKNIPEAEDW KEKHAGKAPV RTMVDILYRG EHRIANIVMT LAAATALWFC
FAGNLQNAAI VAVLGLLCAA IFISFMVQST GKRWPTGVML MVVVLFAFLY SWPIQALLPT
YLKTDLAYNP HTVANVLFFS GFGAAVGCCV GGFLGDWLGT RKAYVCSLLA SQLLIIPVFA
IGGANVWVLG LLLFFQQMLG QGIAGILPKL IGGYFDTDQR AAGLGFTYNV GALGGALAPI
IGALIAQRLD LGTALASLSF SLTFVVILLI GLDMPSRVQR WLRPEALRTH DAIDGKPFSG
AVPFGSAKND LVKTKS
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