Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3548 |
Symbol | sspB |
ID | 6272988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3299265 |
End bp | 3299762 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641727419 |
Product | ClpXP protease specificity-enhancing factor |
Protein accession | YP_001881865 |
Protein GI | 187733416 |
COG category | [R] General function prediction only |
COG ID | [COG2969] Stringent starvation protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000111262 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTGT CACAGCTAAC ACCACGTCGT CCCTATCTGC TGCGTGCATT CTATGAGTGG TTGCTGGATA ACCAGCTCAC GCCGCACCTG GTGGTGGATG TGACGCTCCC TGGCGTGCAG GTTCCTATGG AATATGCGCG TGACGGGCAA ATCGTACTCA ACATTGCGCC GCGTGCTGTC GGCAATCTGG AACTGGCGAA TGATGAGGTG CGCTTTAACG CGCGCTTTGG CGGCATTCCG CGTCAGGTTT CTGTGCCGCT GGCTGCCGTG CTGGCTATCT ACGCCCGTGA AAATGGCGCA GGCACAATGT TTGAGCCTGA AGCTGCCTAC GATGAAGATA CCAGCATCAT GAATGATGAA GAGGCATCGG CAGACAACGA AACCGTTATG TCGGTTATTG ATGGCGACAA GCCAGATCAC GATGATGACA CTCATCCTGA CGATGAACCT CCGCAGCCAC CACGCGGTGG TCGACCGACA TTACGCGTTG TGAAGTAA
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Protein sequence | MDLSQLTPRR PYLLRAFYEW LLDNQLTPHL VVDVTLPGVQ VPMEYARDGQ IVLNIAPRAV GNLELANDEV RFNARFGGIP RQVSVPLAAV LAIYARENGA GTMFEPEAAY DEDTSIMNDE EASADNETVM SVIDGDKPDH DDDTHPDDEP PQPPRGGRPT LRVVK
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