Gene SbBS512_E3545 details

Gene Information

• Locus tag: SbBS512_E3545
• Symbol: rplM
• ID: 6268940
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3297390
• End bp: 3297818
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641727416
• Product: 50S ribosomal protein L13
• Protein accession: YP_001881862
• Protein GI: 187733712
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1.43146e-16
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACTT TTACAGCTAA ACCAGAAACC GTAAAACGCG ACTGGTATGT TGTTGACGCG 
ACCGGTAAAA CTCTGGGCCG TCTGGCTACT GAACTGGCTC GTCGCCTGCG CGGTAAGCAC 
AAAGCGGAAT ACACTCCGCA CGTAGATACC GGTGATTACA TCATCGTTCT GAACGCTGAC 
AAAGTTGCTG TAACCGGCAA CAAGTGTACT GACAAAGTGT ACTATCACCA CACCGGCCAC 
ATCGGTGGTA TCAAACAAGC GACCTTTGAA GAGATGATTG CTCGCCGTCC TGAGCGTGTG 
ATTGAAATCG CGGTTAAAGG CATGTTGCCA AAAGGCCCGC TGGGTCGTGC TATGTTCCGT 
AAACTGAAAG TTTACGCGGG TAACGAGCAC AACCACGCGG CACAGCAACC GCAAGTTCTT 
GACATCTAA 

 

Protein sequence

MKTFTAKPET VKRDWYVVDA TGKTLGRLAT ELARRLRGKH KAEYTPHVDT GDYIIVLNAD 
KVAVTGNKCT DKVYYHHTGH IGGIKQATFE EMIARRPERV IEIAVKGMLP KGPLGRAMFR 
KLKVYAGNEH NHAAQQPQVL DI