Gene SbBS512_E3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3525 
SymbolsstT 
ID6269086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3277822 
End bp3279066 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content56% 
IMG OID641727400 
Productserine/threonine transporter SstT 
Protein accessionYP_001881846 
Protein GI187730781 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3633] Na+/serine symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACGC AACGTTCACC GGGGCTATTC CGGCGTCTGG CTCATGGCAG CCTGGTAAAA 
CAAATCCTGG TCGGCCTTGT TCTGGGGATT CTTCTGGCAT GGATCTCAAA ACCCGCGGCG
GAAGCTGTTG GTCTGTTAGG TACTTTGTTC GTCGGCGCAC TGAAAGCCGT TGCCCCCATC
CTGGTGTTGA TGCTGGTGAT GGCATCTATT GCTAACCACC AGCACGGGCA GAAAACCAAT
ATCCGCCCTA TTTTGTTCCT CTATCTGCTG GGTACCTTCT CTGCTGCTCT GGCCGCAGTC
GTTTTCAGCT TCGCCTTCCC TTCTACCCTG CACTTATCCA GTAGCGCGGG TGATATTTCG
CCACCGTCAG GCATTGTAGA AGTGATGCGC GGGCTGGTAA TGAGCATGGT TTCCAACCCC
ATCGACGCGC TGCTGAAAGG TAACTACATC GGGATCCTGG TGTGGGCAAT TGGCCTCGGT
TTCGCACTGC GTCACGGTAA CGAGACCACC AAAAACCTGG TCAACGATCT GTCGAATGCC
GTCACCTTTA TGGTGAAACT GGTCATTCGC TTCGCACCGA TTGGTATTTT TGGTCTGGTT
TCTTCTACCC TGGCAACCAC CGGTTTCTCC ACACTGTGGG GCTACGCGCA ACTGCTGGTC
GTGCTGGTTG GCTGTATGTT ACTGGTGGCG CTGGTGGTTA ACCCATTGCT GGTGTGGTGG
AAAATTCGTC GTAACCCGTT CCCGCTGGTG CTGCTGTGCC TGCGCGAAAG CGGCGTGTAT
GCCTTCTTCA CCCGCAGCTC TGCGGCGAAC ATTCCGGTGA ATATGGCACT GTGTGAAAAG
CTGAATCTGG ATCGCGATAC CTATTCCGTT TCTATTCCGC TGGGTGCCAC CATCAATATG
GCGGGCGCAG CAATCACCAT TACCGTGTTG ACGCTGGCTG CGGTTAATAC GCTGGGTATC
CCGGTCGATC TGCCCACGGC GCTGCTGTTG AGCGTGGTGG CTTCTCTGTG TGCCTGTGGC
GCATCCGGCG TGGCGGGGGG TTCTCTGCTG CTGATCCCGC TGGCCTGTAA TATGTTCGGT
ATTTCGAACG ATATCGCCAT GCAGGTGGTT GCCGTCGGCT TTATCATCGG CGTATTGCAG
GACTCTTGCG AAACCGCGCT GAACTCTTCA ACTGACGTGC TGTTCACTGC GGCAGCTTGC
CAGGCGGAAG ACGATCGTCT GGCAAATAGC GCCCTGCGTA ATTAA
 
Protein sequence
MTTQRSPGLF RRLAHGSLVK QILVGLVLGI LLAWISKPAA EAVGLLGTLF VGALKAVAPI 
LVLMLVMASI ANHQHGQKTN IRPILFLYLL GTFSAALAAV VFSFAFPSTL HLSSSAGDIS
PPSGIVEVMR GLVMSMVSNP IDALLKGNYI GILVWAIGLG FALRHGNETT KNLVNDLSNA
VTFMVKLVIR FAPIGIFGLV SSTLATTGFS TLWGYAQLLV VLVGCMLLVA LVVNPLLVWW
KIRRNPFPLV LLCLRESGVY AFFTRSSAAN IPVNMALCEK LNLDRDTYSV SIPLGATINM
AGAAITITVL TLAAVNTLGI PVDLPTALLL SVVASLCACG ASGVAGGSLL LIPLACNMFG
ISNDIAMQVV AVGFIIGVLQ DSCETALNSS TDVLFTAAAC QAEDDRLANS ALRN