Gene SbBS512_E3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3523 
Symbol 
ID6271375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3274971 
End bp3275957 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content52% 
IMG OID641727398 
Productoxidoreductase, NAD binding 
Protein accessionYP_001881844 
Protein GI187732927 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGTT TCGCTGTGAT TGGTACGAAC TGGATCACTC GCCAGTTCGT CGAGGCCGCC 
CATGAGAGCG GTAAATACAA GTTAACCGCC GTATATTCCC GCAGCCTTGA ACAGGCCCAG
CACTTCGCCA ATGATTTTTC TGTCGAGCAT CTGTTTACCT CGCTGGAAGC GATGGCGGAA
AGCGATGCCA TTGACGCGGT GTATATTGCC AGCCCGAATG CCCTGCACTT TTCCCAGACA
CAACTTTTCC TTAGCCATAA AATTCATGTG ATTTGCGAGA AACCACTGGC GTCGAATCTG
GCGGAAGTGG ATGCCGCCAT TGCCTGTGCG CGGGAAAATC AGGTGGTGCT GTTTGAGGCA
TTTAAAACCG CCAGCCTGCC GAACTTTCAT TTGCTGCGCC AGGCGCTGCC GAAAGTCGGC
AAATTGCGTA AAGTCTTTTT CAACTATTGC CAGTATTCCT CGCGGTATCA ACGTTACCTG
GATGGTGAGA ATCCCAACAC CTTTAATCCG GCATTCTCTA ACGGTTCAAT TATGGATATC
GGCTTTTACT GCCTGGCGTC GGCGGTGGCA TTATTCGGTG AACCGAAAAG CGTGCAGGCA
ACCGCCAGTT TGTTGGCAAG CGGCGTAGAT GCCCACGGCG TGGTGGTGAT GGATTACGGT
GATTTCAGCG TTACGTTGCT GCACTCAAAG GTCAGTGATT CTGTCCTGGA AAGCGAGATT
CAGGGCGAAG CGGGATCGCT GGTGATTGAA AAACTGTCTG AATGCCAGAA AGTGTGCTTC
GTGCCGCGTG GCAGCCAGAT GCAGGATCTC ACCCAGCCGC AGCATATTAA TACCATGCTC
TACGAAGCAG AGCTGTTTGC TACCCTGGTG GATGAGCATC TGGTGGATCA TCCAGGGCTG
GCGGTCAGTC GCATCACCGC CAAACTGCTG ACTGAGATCC GCCGCCAGAC TGGGGTGATT
TTTCCGGCAG ATAGCGTAAA ACTATAA
 
Protein sequence
MIRFAVIGTN WITRQFVEAA HESGKYKLTA VYSRSLEQAQ HFANDFSVEH LFTSLEAMAE 
SDAIDAVYIA SPNALHFSQT QLFLSHKIHV ICEKPLASNL AEVDAAIACA RENQVVLFEA
FKTASLPNFH LLRQALPKVG KLRKVFFNYC QYSSRYQRYL DGENPNTFNP AFSNGSIMDI
GFYCLASAVA LFGEPKSVQA TASLLASGVD AHGVVVMDYG DFSVTLLHSK VSDSVLESEI
QGEAGSLVIE KLSECQKVCF VPRGSQMQDL TQPQHINTML YEAELFATLV DEHLVDHPGL
AVSRITAKLL TEIRRQTGVI FPADSVKL