Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3495 |
Symbol | ddtA |
ID | 6269637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3246962 |
End bp | 3247873 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641727378 |
Product | tartrate dehydratase subunit alpha |
Protein accession | YP_001881825 |
Protein GI | 187733439 |
COG category | [C] Energy production and conversion |
COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGCG AAAGTAATAA GCAACAGGCA GTGAATAAGT TGACAGAGAT TGTCGCTAAC TTTACCGCCA TGATTTCTAC CCGAATGCCT GATGACGTGG TGGATAAACT AAAACAGCTA AAGGATGCCG AAACGTCGTC GATGGGGAAA ATTATCTACC ATACGATGTT CGACAACATG CAAAAAGCGA TTGACCTGAA TCGTCCTGCC TGTCAGGACA CCGGGGAGAT TATGTTCTTC GTTAAAGTCG GTTCCCGCTT CCCACTGCTT GGCGAGCTGC AAAGCATACT CAAACAAGCC GTGGAAGAGG CAACCGTCAA AGCGCCACTA CGTCACAATG CGGTAGAAAT TTTTGACGAA GTAAACACCG GCAAAAATAC CGGTAGCGGC GTACCGTGGG TCACCTGGGA CATCATCCCC GACAATGACG ATGCGGAAAT CGAAGTTTAC ATGGCAGGTG GCGGCTGCAC GCTACCTGGC CGCTCGAAAG TGTTAATGCC GTCAGAAGGC TACGAAGGCG TGGTGAAATT CGTCTTCGAA AATATCTCCA CCCTCGCCGT AAACGCCTGT CCACCGGTAC TGGTGGGCGT GGGCATCGCC ACCTCGGTGG AAACCGCCGC CGTACTCTCG CGTAAAGCCA TTTTGCGCCC GATTGGCAGC CGCCATCCCA ATCCAAAAGC GGCAGAACTG GAGCTACGCC AGGAAGAAGG ACTCAACCGT CTGGGGATTG GTCCACAAGG GCTGACTGGC AACAGTTCAG TGATGGGCGT ACATATCGAA TCTGCCGCCC GCCATCCGTC AACCATCGGC GTTGCTGTCT CTACCGGCTG CTGGGCGCAT CGTCGCGGCA CACTGCTGGT TCATGCCGAT CTCACCTTTG AAAATCTGTC TCACACCCGG AGCGCGTTAT GA
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Protein sequence | MMSESNKQQA VNKLTEIVAN FTAMISTRMP DDVVDKLKQL KDAETSSMGK IIYHTMFDNM QKAIDLNRPA CQDTGEIMFF VKVGSRFPLL GELQSILKQA VEEATVKAPL RHNAVEIFDE VNTGKNTGSG VPWVTWDIIP DNDDAEIEVY MAGGGCTLPG RSKVLMPSEG YEGVVKFVFE NISTLAVNAC PPVLVGVGIA TSVETAAVLS RKAILRPIGS RHPNPKAAEL ELRQEEGLNR LGIGPQGLTG NSSVMGVHIE SAARHPSTIG VAVSTGCWAH RRGTLLVHAD LTFENLSHTR SAL
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