Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3488 |
Symbol | bacA |
ID | 6270961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3243240 |
End bp | 3244061 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641727373 |
Product | undecaprenyl pyrophosphate phosphatase |
Protein accession | YP_001881820 |
Protein GI | 187732300 |
COG category | [V] Defense mechanisms |
COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGATA TGCACTCGCT GCTGATAGCG GCAATATTGG GTGTGGTCGA AGGATTGACA GAATTTCTGC CGGTATCCAG CACGGGCCAT ATGATTATTG TCGGTCACTT GTTGGGGTTC GAGGGCGACA CGGCGAAAAC CTTTGAAGTT GTGATCCAGT TAGGATCAAT TCTGGCGGTA GTAGTGATGT TCTGGCGGCG TCTGTTTGGC CTGATTGGCA TCCACTTTGG CCGCCCGTTG CAGCACGAAG GAGAAAGCAA AGGTCGTTTA ACGCTGATCC ACATTTTGCT GGGGATGATT CCGGCGGTGG TACTGGGGCT GTTGTTCCAC GACACGATTA AGTCATTGTT TAACCCGATA AATGTGATGT ATGCACTGGT CGTTGGCGGT TTGTTGCTGA TTGCCGCAGA ATGCCTGAAG CCGAAAGAGC CGCGTGCGCC GGGTCTTGAT GATATGACCT ATCGTCAGGC GTTTATGATT GGCTGTTTCC AGTGTCTGGC GCTGTGGCCG GGTTTCTCCC GTTCCGGGGC CACCATTTCA GGTGGGATGC TGATGGGCGT GAGCCGTTAC GCTGCTTCCG AGTTCTCGTT CCTGCTGGCG GTACCGATGA TGATGGGCGC AACGGCGCTC GATCTCTACA AAAGCTGGGG CTTCCTGACA ACCGGCGATA TCCCGATGTT TGCCGTTGGG TTTATCACCG CTTTTGTGGT GGCACTGATA GCGATTAAAA CCTTCCTGCA ATTGATTAAG CGCATTTCGT TTATCCCGTT CGCCATTTAT CGCTTTATTG TGGCGGCTGC GGTGTACGTC GTGTTCTTTT GA
|
Protein sequence | MSDMHSLLIA AILGVVEGLT EFLPVSSTGH MIIVGHLLGF EGDTAKTFEV VIQLGSILAV VVMFWRRLFG LIGIHFGRPL QHEGESKGRL TLIHILLGMI PAVVLGLLFH DTIKSLFNPI NVMYALVVGG LLLIAAECLK PKEPRAPGLD DMTYRQAFMI GCFQCLALWP GFSRSGATIS GGMLMGVSRY AASEFSFLLA VPMMMGATAL DLYKSWGFLT TGDIPMFAVG FITAFVVALI AIKTFLQLIK RISFIPFAIY RFIVAAAVYV VFF
|
| |