Gene SbBS512_E3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3467 
SymbolnudF 
ID6269161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp3222093 
End bp3222722 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content51% 
IMG OID641727352 
ProductADP-ribose pyrophosphatase NudF 
Protein accessionYP_001881801 
Protein GI187730846 
COG category 
COG ID 
TIGRFAM ID[TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0321029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAGC CAGACAACCT GCCCGTTACA TTTGGCAAAA ACGATGTAGA AATTATTGCA 
CGAGAAACAC TTTATCGCGG CTTTTTTTCA TTAGATCTTT ATAGATTTCG TCATCGTCTA 
TTCAACGGGC AAATGAGTCA TGAGGTGCGG CGGGAAATTT TTGAGCGCGG TCACGCCGCA 
GTCTTGCTAC CCTTTGACCC AGTGCGTGAT GAAGTTGTGC TGATTGAGCA GATTCGAATT 
GCCGCGTACG ACACTAGCGA AACCCCCTGG CTACTGGAGA TGGTTGCCGG GATGATTGAA 
GAGGGTGAAA GTGTGGAAGA TGTTGCCCGT CGCGAAGCGA TTGAAGAGGC GGGGCTGATA 
GTCAAACGGA CCAAACCGGT GTTAAGTTTC CTGGCAAGCC CGGGGGGCAC CAGTGAGCGT 
TCGTCAATTA TGGTGGGCGA AGTGGACGCC ACGACCGCAA GCGGTATTCA TGGTCTGGCT 
GATGAAAACG AAGATATTCG CGTTCATGTG GTAAGCCGGG AACAGGCATA CCAGTGGGTA 
GAAGAGGGGA AAATCGACAA CGCAGCGTCG CTCATCGCTT TGCAATGGCT GCAGCTGCAC 
CATCAAGCGT TAAAAAATGA GTGGGCATAA
 
Protein sequence
MLKPDNLPVT FGKNDVEIIA RETLYRGFFS LDLYRFRHRL FNGQMSHEVR REIFERGHAA 
VLLPFDPVRD EVVLIEQIRI AAYDTSETPW LLEMVAGMIE EGESVEDVAR REAIEEAGLI 
VKRTKPVLSF LASPGGTSER SSIMVGEVDA TTASGIHGLA DENEDIRVHV VSREQAYQWV 
EEGKIDNAAS LIALQWLQLH HQALKNEWA