Gene SbBS512_E3463 details

Gene Information

• Locus tag: SbBS512_E3463
• Symbol: parE
• ID: 6269570
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 3218316
• End bp: 3220208
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641727348
• Product: DNA topoisomerase IV subunit B
• Protein accession: YP_001881797
• Protein GI: 187730460
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCAAA CTTATAACGC TGATGCCATT GAGGTACTCA CCGGACTTGA GCCGGTTCGC 
CGCCGTCCGG GGATGTATAC CGATACCACT CGCCCTAACC ATTTGGGGCA AGAAGTCATT 
GATAACAGTG TGGATGAAGC ACTGGCGGGT CACGCAAAAC GCGTGGACGT TATTTTACAT 
GCTGACCAGT CGTTAGAAGT TATTGACGAT GGGCGCGGGA TGCCGGTGGA TATTCACCCG 
GAAGAGGGTG TACCGGCGGT TGAACTGATT CTTTGCCGTC TGCATGCAGG CGGTAAATTC 
TCTAACAAAA ATTACCAGTT CTCTGGCGGC CTGCATGGCG TGGGGATTTC GGTGGTTAAC 
GCCCTGTCGA AGCGCGTAGA AGTTAACGTG CGCCGCGATG GTCAGATTTA TAACATCGCC 
TTTGAAAATG GCGAAAAGGT GCAGGATTTA CAGGTTGTCG GCACTTGCGG TAAACGCAAT 
ACCGGCACCA GCGTCCATTT CTGGCCGGAT GAAACCTTCT TCGATAGCCC GCGTTTTTCT 
GTTTCACGCC TGACGCATGT GCTGAAAGCC AAAGCAGTAC TGTGCCCCGG CGTTGAGATT 
ACCTTTAAAG ATGAGATCAA CAACACCGAA CAGCGCTGGT GCTATCAGGA CGGTCTGAAT 
GATTACCTGG CGGAAGCGGT AAACGGTTTA CCGACGCTGC CAGAAAAACC GTTTATCGGT 
AATTTCGCTG GCGATACTGA AGCGGTGGAC TGGGCGCTAC TGTGGCTGCC GGAAGGCGGT 
GAATTGCTGA CCGAAAGCTA CGTCAACCTG ATCCCAACGA TGCAGGGCGG TACCCATGTT 
AATGGTCTGC GTCAGGGCCT GCTGGACGCG ATGCGTGAGT TCTGTGAATA CCGCAACATT 
CTGCCGCGCG GTGTAAAGCT GTCGGCGGAA GATATCTGGG ATCGCTGCGC CTATGTGCTG 
TCAGTAAAAA TGCAGGATCC GCAGTTTGCC GGGCAGACCA AAGAGCGTCT CTCTTCGCGT 
CAGTGCGCGG CATTCGTTTC TGGCGTGGTG AAAGATGCCT TTATCCTGTG GCTGAACCAG 
AACGTTCAGG CGGCGGAGTT GCTGGCAGAG ATGGCGATTT CCAGCGCCCA GCGTCGTATG 
CGTGCGGCTA AAAAAGTGGT GCGTAAAAAG CTGACCAGCG GTCCGGCGCT GCCTGGCAAA 
CTGGCTGACT GTACCGCGCA GGACCTTAAC CGCACCGAAC TGTTTCTTGT GGAAGGTGAC 
TCCGCAGGCG GATCTGCCAA GCAGGCGCGC GATCGCGAAT ATCAGGCGAT CATGCCACTG 
AAAGGTAAGA TCCTTAACAC CTGGGAAGTC TCTTCCGACG AAGTGCTGGC TTCGCAGGAA 
GTGCACGATA TTTCGGTAGC GATCGGTATC GATCCTGACA GCGACGATTT GAGCCAGCTT 
CGTTACGGCA AGATCTGTAT CCTGGCGGAT GCTGACTCCG ATGGTCTGCA CATTGCCACG 
CTGCTCTGCG CTTTGTTTGT AAAACACTTC CGCGCGTTGG TGAAACACGG TCACGTTTAC 
GTCGCACTGC CACCGCTCTA CCGTATTGAT CTCGGGAAAG AGGTTTATTA CGCGCTGACG 
GAAGAAGAGA AAGAGGGCGT ACTTGAGCAA TTAAAACGCA AGAAAGGCAA GCCGAACGTC 
CAGCGTTTTA AAGGTCTGGG GGAAATGAAC CCGATGCAAT TGCGCGAAAC CACGCTTGAT 
CCGAACACTC GCCGTCTGGT GCAGTTGACT ATCGATGATG AAGACGATCA GCGTACTGAC 
GCGATGATGG ACATGCTACT GGCGAAGAAA CGCTCGGAAG ATCGCCGCAA CTGGTTGCAA 
GAGAAAGGCG ACATGGCGGA GATTGAGGTT TAA 

 

Protein sequence

MTQTYNADAI EVLTGLEPVR RRPGMYTDTT RPNHLGQEVI DNSVDEALAG HAKRVDVILH 
ADQSLEVIDD GRGMPVDIHP EEGVPAVELI LCRLHAGGKF SNKNYQFSGG LHGVGISVVN 
ALSKRVEVNV RRDGQIYNIA FENGEKVQDL QVVGTCGKRN TGTSVHFWPD ETFFDSPRFS 
VSRLTHVLKA KAVLCPGVEI TFKDEINNTE QRWCYQDGLN DYLAEAVNGL PTLPEKPFIG 
NFAGDTEAVD WALLWLPEGG ELLTESYVNL IPTMQGGTHV NGLRQGLLDA MREFCEYRNI 
LPRGVKLSAE DIWDRCAYVL SVKMQDPQFA GQTKERLSSR QCAAFVSGVV KDAFILWLNQ 
NVQAAELLAE MAISSAQRRM RAAKKVVRKK LTSGPALPGK LADCTAQDLN RTELFLVEGD 
SAGGSAKQAR DREYQAIMPL KGKILNTWEV SSDEVLASQE VHDISVAIGI DPDSDDLSQL 
RYGKICILAD ADSDGLHIAT LLCALFVKHF RALVKHGHVY VALPPLYRID LGKEVYYALT 
EEEKEGVLEQ LKRKKGKPNV QRFKGLGEMN PMQLRETTLD PNTRRLVQLT IDDEDDQRTD 
AMMDMLLAKK RSEDRRNWLQ EKGDMAEIEV