Gene SbBS512_E3436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3436 
Symbol 
ID6269593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp3196120 
End bp3196779 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content51% 
IMG OID641727322 
Producthypothetical protein 
Protein accessionYP_001881771 
Protein GI187732286 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTA TTCAAGATAT CATCGCTGCG CTCTGGCAAC ACGACTTTGC CGCGCTGGCG 
GATCCTCATA TTGTTAGCGT TGTTTACTTT GTCATGTTTG CCACGCTGTT TTTAGAAAAC 
GGCCTGCTGC CCGCCTCATT TTTGCCAGGC GACAGCTTGT TGATACTGGC AGGCGCATTG 
ATTGCCCAGG GGGTTATGGA TTTTCTGCCT ACGATTGCGA TTCTGACCGC CGCAGCAAGT 
CTGGGCTGCT GGCTAAGTTA TATTCAGGGG CGCTGGTTAG GGAATACCAA AACGGTGAAA 
GGCTGGCTGG CACAGCTTCC TGCTAAATAT CACCAGCGCG CCACCTGCAT GTTTGACCGC 
CACGGTCTGC TGGCGCTGCT GGCTGGACGT TTTCTTGCAT TTGTCCGTAC GCTGCTGCCA 
ACCATGGCGG GAATTTCCGG TCTGCCAAAC CGCCGCTTCC AGTTTTTCAA CTGGTTAAGT 
GGATTGCTGT GGGTCAGCGT GGTAACCAGT TTTGGCTATG CCTTAAGTAT GATTCCGTTC 
GTTAAACGCC ATGAAGATCA GGTAATGACG TTCCTGATGA TCCTGCCAAT TGCCTTGTTA 
ACCGCTGGCT TGTTAGGCAT GCTGTTTGTG GTGATTAAAA AAAAATACTG TAACGCCTGA
 
Protein sequence
MAVIQDIIAA LWQHDFAALA DPHIVSVVYF VMFATLFLEN GLLPASFLPG DSLLILAGAL 
IAQGVMDFLP TIAILTAAAS LGCWLSYIQG RWLGNTKTVK GWLAQLPAKY HQRATCMFDR 
HGLLALLAGR FLAFVRTLLP TMAGISGLPN RRFQFFNWLS GLLWVSVVTS FGYALSMIPF 
VKRHEDQVMT FLMILPIALL TAGLLGMLFV VIKKKYCNA