Gene SbBS512_E3433 details

Gene Information

• Locus tag: SbBS512_E3433
• Symbol: exbD
• ID: 6269215
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 3193375
• End bp: 3193800
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641727319
• Product: biopolymer transport protein ExbD
• Protein accession: YP_001881768
• Protein GI: 187732902
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0848] Biopolymer transport protein
• TIGRFAM ID: [TIGR02803] TonB system transport protein ExbD, group 1

Plasmid Coverage information

• Num covering plasmid clones: 46
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATGC ATCTTAACGA AAACCTCGAC GATAACGGCG AAATGCATGA TATCAACGTG 
ACGCCGTTTA TCGACGTGAT GTTGGTTCTG CTGATTATCT TTATGGTGGC GGCACCGTTA 
GCGACGGTAG ATGTGAAGGT GAACTTGCCT GCTTCTACCA GCACGCCGCA GCCGCGCCCG 
GAAAAACCGG TTTATCTGTC GGTGAAGGCA GACAACTCGA TGTTTATCGG TAACGATCCG 
GTCACCGATG AAACAATGAT TACGGCGTTG AATGCGTTAA CCGAAGGCAA GAAAGACACC 
ACCATCTTCT TCCGAGCGGA TAAAACCGTC GATTACGAGA CGTTGATGAA GGTAATGGAT 
ACGCTGCATC AGGCGGGTTA CCTGAAGATA GGTCTGGTCG GCGAAGAAAC CGCCAAAGCG 
AAGTAA 

 

Protein sequence

MAMHLNENLD DNGEMHDINV TPFIDVMLVL LIIFMVAAPL ATVDVKVNLP ASTSTPQPRP 
EKPVYLSVKA DNSMFIGNDP VTDETMITAL NALTEGKKDT TIFFRADKTV DYETLMKVMD 
TLHQAGYLKI GLVGEETAKA K